kleinstein / presto / issues / #39 - Add select to SplitSeq — Bitbucket

Issue #39 resolved

Jason Vander Heiden created an issue 2016-05-02

Might be nice to have a select command in SplitSeq to pull out a specific group of sequences by regex search in an annotation (instead of having to use sample or group).

Comments (6)

Jason Vander Heiden reporter
Also allow an input file of values to select.
- 2017-01-03T21:15:32+00:00
Jason Vander Heiden reporter
- assigned issue to
  
  ssnn
- 2017-01-03T21:15:45+00:00
ssnn
Commit 3083791 TODO: add the unit testing part.
- 2017-01-17T21:03:57+00:00
Jason Vander Heiden reporter
Doesn't seem to work, and a lot of docs are missing. I'm fixing the docs and trying to figure out what's going on right now.
- 2017-01-17T21:29:16+00:00
Jason Vander Heiden reporter
Also, this doesn't do regex matches, as implemented. Which is fine, we don't really need that right now.
- 2017-01-17T22:11:08+00:00
Jason Vander Heiden reporter
- changed status to resolved
Working as is.
- 2017-02-07T22:14:53+00:00
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Assignee: ssnn

Type: enhancement

Priority: minor

Status: resolved

Votes: 0

Watchers: 2

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