Update example workflows for presto v0.5.7

Issue #61 resolved
Jason Vander Heiden created an issue

There are lots of little pipeline simplification updates in presto v0.5.7, such as primer/barcode field renaming and collapse action in PairSeq.

Need to simplify the relevant workflows with this changes.

Comments (2)

  1. Jason Vander Heiden reporter

    Partially done in 27f61fa.

    Still need to change and test:

    • Remove ParseHeaders-expand/rename steps from 454 workflow.
    • Remove ParseHeaders-expand/rename steps from MiSeq no-UMI workflow.
    • Remove ParseHeaders-rename step from AbSeq workflow.
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