Benchmark scoper vs DefineClones and light_cluster

Issue #20 new
ssnn created an issue

We need to benchmark scoper and DefineClones, and identify and document any differences prior deprecation of DefineClones. Benchmark as well with large datasets. See also #changeo/147. Same for light_cluster.py. Then update tutorials.

Comments (7)

  1. Roy Jiang

    @Meng Wang General task: for some of your datasets, runtime vs size (number sequences, subsample). Generate the plot for scoper defineClones changeo defineClones.py

  2. Log in to comment