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Adding imputation to targeting model creation

Issue #3 resolved
Jason Vander Heiden created an issue

Need to add an argument to createMutabilityMatrix(), createSubstitutionMatrix(), and createTargetingModel() providing options for what to insert in the case of missing data. For example, pseudocount, minimum value, mean of some set, etc.

Comments (2)

  2. Jason Vander Heiden reporter

    It looks like @angcui resolved this by adding the minNumMutations and minNumSeqMutations arguments to createSubstitutionMatrix() and createMutabilityMatrix(), respectively.

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Type
enhancement
Priority
major
Status
resolved
Milestone
–
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