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Issues (101–125 of 165)

Title T P Status Votes Assignee Milestone Created Updated Actions
#72: R CMD check issues
bug trivial resolved
#77: Update calcTargetingDistance
task minor resolved
#71: website change for HKL_S5F
enhancement minor resolved
#76: add baseline correction to reference on readthedocs
enhancement minor resolved
#73: inconsistency in 1-mer substitution matrices
task minor resolved
#74: Make a function to make degenerate 5-mer model
enhancement minor resolved
#70: Add human and mouse light chain models
enhancement minor resolved
#68: collapseClones() returns NAs in CLONAL_SEQUENCE
bug major invalid
#67: calcBaseline, error when no clones to collapse
bug major resolved
#61: distToNearest vignette. Add cross-sample example
task trivial resolved
#62: groupColors argument to plotBaselineSummary doesn't order values
bug trivial resolved
#18: distToNearest needs better error checking
enhancement minor resolved
#65: Use alakazam dependency version to build from the repo or from CRAN
task minor resolved
#60: Allow lowercase input
bug minor resolved
#59: Clarify selection PDF convolution requirement in docs
enhancement trivial resolved
#63: Replace InfluenzaDb with ExampleDb from alakazam
enhancement minor resolved
#54: Running groupBaseline twice results in incorrect summary stats
bug major resolved
#1: Add cross-sample distToNearest mode
enhancement major resolved
#57: getClosestBy1Mer is broken when model=aa
bug critical resolved
#58: dist1Mers is no longer used
task trivial resolved
#53: Example column names
bug major resolved
#55: distToNearest could use more better error messages
bug minor resolved
#48: Need to verify regionDefinition argument works as expected
bug major resolved
#43: createMutabilityMatrix is SLOW
bug minor resolved
#45: R CMD Check example times
enhancement major resolved
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