Change airr variable names for alakazam style version

Issue #28 resolved
ssnn created an issue
  • Go back to old names germline_alignment_COUNT and germline_alignment. Basically, revert commit 52cca7a, which is supposed to use airr column names
  • User shorter names, alakazam-style: "id", "seq" and "germ" instead of "sequence_id", "sequence_alignment" and "germline_alignment".

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