1. Konstantin Okonechnikov Avatar Konstantin Okonechnikov
  2. Untitled project
  3. Qualimap

Issues

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Issues (1–20 of 20)

Title T P Status Votes Assignee Created Updated Actions
#82: Odd coverage histogram
bug minor open
#66: Release Versioning
proposal minor new 2
#74: ignoring option MaxPermSize=1024m; support was removed in 8.0
bug minor open
#80: mean insert size
bug minor open
#68: Multi-sample BAM QC generates weird spikes in Insert Size plot
bug minor resolved 1
#64: multi-bamqc ignores group names if each group consists of one sample only
bug minor new
#63: Intended effects of bamqc --collect-overlap-pairs
proposal minor new
#62: autodetection of format of -gff/-gtf file for bamqc and rnaseq fails with comments in file
bug minor new
#55: Incoherence between insert_size_histogram.txt and genome_insert_size_histogram.png
bug minor new 1
#51: A few suggestions for `qualimap rnaseq` module
proposal minor new
#20: Add tool to detect strand-specificity
enhancement minor resolved
#46: "ACGT Content" section does not compute N values
bug minor resolved
#48: Counts QC: add raw data reports
proposal minor new
#44: Too slow?
task minor new
#37: Support SVG format for images
enhancement minor new
#24: BAM QC: in BED format only 3 initial columns are required
proposal minor new
#2: Multisample BAM-QC: introduce bar plots
proposal minor new
#1: Configuration file
enhancement minor new
#10: Improve command-line options for annotation files
proposal minor new
#5: Multisample BAM QC: keep report in one file
enhancement minor new