== RSeQC Galaxy Wrapper ==
This is a Galaxy wrapper for the RSeQC RNA-Seq QC package.
** Installation **
Installation from a tool shed provides the necessary tool dependencies, R, numpy, and RSeQC.
Otherwise, make sure that R and the RSeQC scripts are in the path and run under the Galaxy environment.
Move the xml files to a subdirectory of your tools directory and add lines in tool_conf.xml to point to them.
Restart the Galaxy server.
Requires Python 2.7
** Attribution **
The RSeQC package and associated documentation can be found at: http://rseqc.sourceforge.net/
The galaxy wrapper code was written by
Nilesh Kavthekar, School of Engineering and Applied Sciences, University of Pennsylvania, Class of 2016
Lance Parsons, Lewis-Sigler Institute for Integrative Genomics, Princeton University,
Bjorn Gruning, University of Freiburg, email@example.com
The development of the wrapper code is housed on BitBucket at: https://bitbucket.org/lance_parsons/rseqc_galaxy_wrapper