Commits

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Author Commit Message Labels Comments Date
chuttenh
[svn r66] Fix a bug in Combiner that was misaligning genes in large data sets
chuttenh
[svn r64] Improve Pearson correlation to ignore missing values
chuttenh
[svn r63] Fix pointer-based OpenToken to avoid running off the end of the string
chuttenh
[svn r62] Add everything flag to Dab2Dad and compact dataset construction
chuttenh
[svn r61] Add default CPTs to SMILE Bayes nets for naive learning
chuttenh
[svn r60] Add normalization flag to Dat2Dab
chuttenh
[svn r59] Add exponential nodes to functional Bayes nets
chuttenh
[svn r58] Fix unnecessary (or harmful) unsigned int casts
chuttenh
[svn r57] Add beta distribution to CStatistics
chuttenh
[svn r56] Safekeeping checkin before ripping apart CDataset
chuttenh
[svn r55] Add implementation for the -t testing argument of Answerer
chuttenh
[svn r54] Add z-score normalization to Normalizer
chuttenh
[svn r53] Add GetGeneNames to libBioUtils CGenome
chuttenh
[svn r52] Add single datum evaluation to libBioUtils Bayes nets
chuttenh
[svn r51] Add proper negative pair functional handling to DChecker and WilcoxonRankSum
chuttenh
[svn r50] Update Combiner to take advantage of more memory (not use subsets)
chuttenh
[svn r49] Improve GO annotation parsing to relax and allow human annotations
chuttenh
[svn r48] Fix Linux compatibility in Distancer and make gene list inclusion more strict
chuttenh
[svn r47] Update Converter to average dats representing z-scores
chuttenh
[svn r46] Add WilcoxonRankSum (AUC) calculation to libBioUtils statistics
chuttenh
[svn r45] Add masking to Dab2Dad dataset generation
chuttenh
[svn r44] Fix Dab2Dad compilation problems on Linux
chuttenh
[svn r43] Add per-Bayes net dad file creation with Dab2Dad (allowing hidden nodes)
chuttenh
[svn r42] Add BNWrangler with functionality of BNConverter, BNTester, and DChecker
chuttenh
[svn r41] Fix Linux shared memory code (Dab2Dad and dataset)
chuttenh
[svn r40] Add serializability to compact matrices and compact data sets
chuttenh
[svn r39] Add naive learning to Smile networks
chuttenh
[svn r38] Add complete trie implementation
chuttenh
[svn r37] Add a trie class to libBioUtils
chuttenh
[svn r36] Fix the ELR implementation - it might even work now!
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