sleipnir / tools / SeekReader / stdafx.h

* This file is provided under the Creative Commons Attribution 3.0 license.
* You are free to share, copy, distribute, transmit, or adapt this work
* PROVIDED THAT you attribute the work to the authors listed below.
* For more information, please see the following web page:
* This file is a component of the Sleipnir library for functional genomics,
* authored by:
* Curtis Huttenhower (
* Mark Schroeder
* Maria D. Chikina
* Olga G. Troyanskaya (, primary contact)
* If you use this library, the included executable tools, or any related
* code in your work, please cite the following publication:
* Curtis Huttenhower, Mark Schroeder, Maria D. Chikina, and
* Olga G. Troyanskaya.
* "The Sleipnir library for computational functional genomics"
#ifndef STDAFX_H
#define STDAFX_H


#include <fstream>
#include <iostream>
#include <map>
#include <string>
#include <omp.h>
using namespace std;

#include <pthread.h>

#include "seekbasic.h"
#include "seekmap.h"
#include "seekreader.h"
#include "seekwriter.h"
#include "sparsematrix.h"
#include "meta.h"
using namespace Sleipnir;

#endif // STDAFX_H