after "conda create -n mageck-vispr mageck-vispr" hangs on "Solving enviroment"
Issue #37
new
I went over the installation of Mageck-Vispr as described, however It keep freezing on the conda create -n mageck-vispr mageck-vispr where I get stuck on the "Solving enviromen:" Could you help please.
Thanks Andrej
Comments (3)
-
-
I'm also experiencing this issue on a fresh install.
I was able to install vispr with
conda install --channel bioconda vispr
. -
You have to add the following to the .condarc configuration file in your home directory. This error has to do with various R packages in miniconda, and is not specific to mageck-vispr. I'm not sure that ALL the below are necessary, but all were suggested on various forums, and the installation works for me on Mac OSx
channels: - bioconda - conda-forge - https://repo.anaconda.com/pkgs/free/linux-64 - https://repo.anaconda.com/pkgs/free/noarch - https://repo.anaconda.com/pkgs/pro/linux-64 - https://repo.anaconda.com/pkgs/pro/noarch - nodefaults default_channels: - https://repo.anaconda.com/pkgs/main - https://repo.anaconda.com/pkgs/free pinned_packages: - r-base >=3.4
- Log in to comment
Hi folks, I have the same error.
I set up miniconda following your instructions and added bioconda. Here are my commands:
I'll let this run over the weekend in case it is just super slow.
EDIT: This completed over the weekend for me. Not sure why it took at least a few hours.