error running workflow
Hi,
I tried several times to run the esc-testdata, and keep on getting this error. Can you help?
Error in job mageck_mle while creating output files results/test/mle.gene_summary.txt, results/test/mle.sgrna_summary.txt. RuleException: CalledProcessError in line 212 of /Users/yt78/Downloads/esc-testdata/Snakefile: Command 'mageck mle --norm-method median --output-prefix results/test/mle --genes-var 0 --count-table results/count/all.count.txt --design-matrix /Users/yt78/Downloads/esc-testdata/designmatrix.txt 2> logs/mageck/test/mle.log' returned non-zero exit status 255. File "/Users/yt78/Downloads/esc-testdata/Snakefile", line 212, in __rule_mageck_mle File "/Users/yt78/miniconda3/lib/python3.6/concurrent/futures/thread.py", line 56, in run Will exit after finishing currently running jobs. Exiting because a job execution failed. Look above for error message
Thank you.