Configuration issue

Issue #45 new
Nouran created an issue

I am currently going through pipeline configuration for MaGeCK-VISPR and I keep getting the following error message after I finish configuring (emacs config.yaml) and then when I test if the configuration file has been properly done by (snakemake -n) I get this error:

WorkflowError in line 13 of /Users/nouran/Downloads/esc-test/Snakefile: Config file is not valid JSON or YAML. In case of YAML, make sure to not mix whitespace and tab indentation. File "/Users/nouran/Downloads/esc-test/Snakefile", line 13, in <module>

Please let me know how to fix it.

Thanks!

Comments (2)

  1. Aaron

    I’m getting the same thing - have either of you @Nouran or @YANG QIYUAN resolved this? Does anyone else know how this could possibly be resolved?

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