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releaseCandidate-8.5.5
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Author Commit Message Date Builds
250+ commits behind master.
dcnorris
fix for bug in narrowpeak parser causing all but the first chromosome to be ignored
dcnorris
incremented version for minor release
dcnorris
fix for caching bug caused by downloads cut off by termination of the program
jecksteN
fix cache table sorting
dcnorris
adding app manager menu item icon
dcnorris
adding app manager menu item icon
dcnorris
adding app manager menu item to tools menu
dcnorris
incremented version for minor release
dcnorris
organized species # Conflicts: # core/igb/src/main/java/com/affymetrix/igb/view/welcome/GeneConfiguration.java
dcnorris
dcnorris
updated version to 8.5..3 for minor release
dcnorris
fix for possible division by zero
dcnorris
dcnorris
dcnorris
dcnorris
dcnorris
fix for casting assumption in JRPMenu class
dcnorris
removed merge conflict symbols from file
dcnorris
fixes for small mistakes in new synonyms for unmapped species from UCSC
jecksteN
fix error handling
jecksteN
fix symloader
jecksteN
IGBF-1043 fix plugin manager update issue
dcnorris
added code to truncate bookmark menu items to prevent rendering issues with very long names
dcnorris
renamed javafxfilechooser
jecksteN
fix filetracker usage
dcnorris
added another sanity check to harden against possible race condition preventing valid tabholder state
jecksteN
fix file tracking in protannot
jecksteN
set static height for protannot
dcnorris
fix for possible context in filechooser causing exception when passed a file and not a directory
dcnorris
fix for NPE when launching protannot
dcnorris
fixed IGBF-1061
dcnorris
incrementing genoviz version
dcnorris
small adjustments to insertion glyph
dcnorris
insertion glyph reworked as triangle shape
dcnorris
fixed bug in IGBAuthenticator related to check on optional not being applied leading to posible exception if option is empty
dcnorris
fixed bug in possible empty string being passed to string decrypter from basedataprovider, and also hardened error handling around dataprovider intialization to prevent errors in any single dataprovider initialization attempt affecting others
ann.loraine
Correcting typo. Adding text.
jecksteN
fix protannot uninstall
dcnorris
updated install4j to remove window preferences during the next release
jecksteN
IGBF-1001 fix paxml save last filename issue
jecksteN
fix cache panel
jecksteN
add cache reset pregf
dcnorris
updated install4j to remove window preferences during the next release
dcnorris
fix for possible hidden bottomTrayPane caused by race condition on startup
dcnorris
fixed bug in IGBAuthenticator related to check on optional not being applied leading to posible exception if option is empty
dcnorris
fixed bug in possible empty string being passed to string decrypter from basedataprovider, and also hardened error handling around dataprovider intialization to prevent errors in any single dataprovider initialization attempt affecting others
dcnorris
updated version for next minor release
dcnorris
added another sanity check to harden against possible race condition preventing valid tabholder state
dcnorris
updated install4j to remove window preferences during the next release
dcnorris
updated install4j to remove window preferences during the next release
jecksteN
fix symloader
dcnorris
fix for possible hidden bottomTrayPane caused by race condition on startup
dcnorris
added news link to installer update screen
dcnorris
incrementing version for minor release
dcnorris
fix for bug in buildIndex method related to non remote tab delimited files that are not using bed format (e.g. wig)
dcnorris
added Ann's changes to README