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Castor (Indel-Aware Phylogenetic Tree Inference)
Castor is a phylogenetic tree inference software that implements a new class of indel-aware substitution models in the Maximum Likelihood framework.
Documentation
- Compiling Castor
- Features and project structure
- Executing an analysis
- Open issues
- Contributing to Castor (for developers)
Supported platforms
- Debian
- Ubuntu 14.04, 16.04
- CentOS 6.9, 7.0
- Mac OS (10.13)
Roadmap
Check here the roadmap with the upcoming features
Bugs and Feature Requests
Report a bug or request a feature here
How to cite Castor
- L. Gatti, Realistic evolutionary models for phylogenetic-guided analyses, PhD Dissertation, University of Zurich, 2019
- L. Gatti and M. Maiolo, et al., Phylogenetic inference under indel-aware evolutionary model increases tree reliability and robustness, manuscript in preparation
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