Commits

Sean Davis committed 4458779

Had left func() definition out for meltVcf--fixes "namespace" has no attribute "func"

Comments (0)

Files changed (2)

seqtools/commands/vcfCommands.py

                             help='Sample name to include in first column of output [default=None]')
 meltVcf_parser.add_argument('-i','--includeHeader',action='store_true',
                             help='Include VCF header in the output; useful for including definitions of columns')
+meltVcf_parser.set_defaults(func=meltVcf)
+
 
 strelka_parser = varscan_subparsers.add_parser('strelka',
                                               help="process a vcf strelka-produced vcf file to add tumor/normal read count info fields (TUMREF,NORMREF,TUMALT,NORMALT,TUMVAF)")
 from setuptools import setup, find_packages
 import sys, os, glob
 
-version = '0.3.2'
+version = '0.3.3'
 
 setup(name='seqtools',
       version=version,
Tip: Filter by directory path e.g. /media app.js to search for public/media/app.js.
Tip: Use camelCasing e.g. ProjME to search for ProjectModifiedEvent.java.
Tip: Filter by extension type e.g. /repo .js to search for all .js files in the /repo directory.
Tip: Separate your search with spaces e.g. /ssh pom.xml to search for src/ssh/pom.xml.
Tip: Use ↑ and ↓ arrow keys to navigate and return to view the file.
Tip: You can also navigate files with Ctrl+j (next) and Ctrl+k (previous) and view the file with Ctrl+o.
Tip: You can also navigate files with Alt+j (next) and Alt+k (previous) and view the file with Alt+o.