GABI Report (Runs 150-152)

Summary report for multiple GABI runs. Click on a Run header below for a detailed interactive trace for that run.

Run 150

Catalog IDphix
Timestamp2013-08-31T17:06:39.316036
Expected # Contigs1
Expected Genome Size5,386 bp
Burn In0
Thinning1
# Samples50,000
# Accepted18,509 (37.0%)
Total Sample Time64,283.1 sec
Min. Sample Time0.0 sec
Max. Sample Time25.9 sec
Mean Sample Time1.3 sec
Posterior Distribution
Majority-Rule Consensus [FASTA]

Run 151

Catalog IDphix
Timestamp2013-08-31T17:08:29.265139
Expected # Contigs1
Expected Genome Size5,386 bp
Burn In0
Thinning1
# Samples50,000
# Accepted18,186 (36.4%)
Total Sample Time72,600.6 sec
Min. Sample Time0.0 sec
Max. Sample Time24.6 sec
Mean Sample Time1.5 sec
Posterior Distribution
Majority-Rule Consensus [FASTA]

Run 152

Catalog IDphix
Timestamp2013-09-02T16:14:13.803536
Expected # Contigs1
Expected Genome Size5,386 bp
Burn In0
Thinning1
# Samples50,000
# Accepted18,294 (36.6%)
Total Sample Time72,983.2 sec
Min. Sample Time0.0 sec
Max. Sample Time33.2 sec
Mean Sample Time1.5 sec
Posterior Distribution
Majority-Rule Consensus [FASTA]

All Runs

# Samples150,000
# Accepted54,989 (36.7%)
Total Sample Time209,866.9 sec
Min. Sample Time0.0 sec
Max. Sample Time33.2 sec
Mean Sample Time1.4 sec
Posterior Distribution
Majority-Rule Consensus [FASTA]

Convergence

(a) Mixing behvaior
(b) Cumulative frequencies of individual edges in each chain
(c) Average st. dev. of the cumulative edge frequencies across chains
(d) Split frequencies at the final sample