1. Michal Jamroz
  2. ClusCo

Overview

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ClusCo: Clustering and Comparison of Protein Models

Michał Jamróz, Andrzej Koliński chee.jpg

Full text BMC Bioinformatics 2013, 14:62 doi:10.1186/1471-2105-14-62

Installation

mkdir build
cd build
cmake ../
make

binaries creates in src directory

Requirements: gcc>=4.2, tclap library. For GPU code compilation: CUDA package and CUDA compatible gcc version.

Help

clusco --help

or doc/manual.pdf file

MacOSX users: if you have problems with compilation, check if system contains gcc>=4.2 and/or if Xcode with enabled OpenMP (ENABLE_OPENMP_SUPPORT = YES and LD_OPENMP_FLAGS = -fopenmp).