1. Sarah Richardson
  2. GeneDesign-dev

Source

GeneDesign-dev / cron_script

#!/bin/bash -l
# running on genepool02 as gpinterp user
module load perl

cd /usr/common/jgi/synthbio/genedesign-dev
git pull

./Build clean

perl Build.PL --conf_path /usr/common/jgi/synthbio/etc/GeneDesign --script_path /usr/common/jgi/synthbio/GeneDesign/bin --tmp_path $TMPDIR --graphing_support 1
./Build
./Build test
./Build install

chgrp -R genome ../GeneDesign