1. Nicola Segata
  2. LEfSe

Source

LEfSe /

Filename Size Date modified Message
example
lefsebiom
188 B
changed .hgtags
0 B
Biom support using breadcrumbs and biom
22.6 KB
When modifying feature names, prevent name from starting with an underscore (_).
9.5 KB
Fug fix in the reporting file for --wilc 0
1.5 KB
first commit of LEfSe into BitBucket
1.1 KB
added license.txt
14.7 KB
added the Kruskall-Wallis p-values for significant features in the tabular output (fifth column)
7.7 KB
added the Kruskall-Wallis p-values for significant features in the tabular output (fifth column)
9.8 KB
added option for reporting important features and outputing in TSV format
3.3 KB
cleaned up example biom command
173 B
first commit of LEfSe into BitBucket
6.4 KB
fixed the output_table format and set the subsampling rate for LDA at 0.67 for sucessfully handling cases with 3 samples for class (thanks to Peter Turnbaugh for finding the problem on this)