LEfSe Plots

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Issue #20 new
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Hi Nicola,

Thanks so much for developing LEfsE.

When I make the "pairwise" plots at the OTU level, the figure shows all of the taxa in the legend (see attached).

However, when I use the same input and attempt to make a cladogram, most of the taxa in the legend no longer exist (see attached).

Any thoughts?

Thanks,

James

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