petermr avatar petermr committed ef1f6d0

added animation for reactions

Comments (0)

Files changed (120)

 	
 
 (build
-	map			org.xmlcml.cml.crystaleye.lensfield.cml.ReactionMap	           
+	map		org.xmlcml.cml.crystaleye.lensfield.cml.ReactionMap	           
 	:input 		electron
 	:output		**/reaction.map.cml
 	)

orgtest1/.lf/log-20100708080603.txt

+(build-started 2010-07-08T08:06:00+0100)
+(task cleaned org.xmlcml.cml.crystaleye.lensfield.cml.AttributeRemover/run 2010-07-08T08:04:16+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task cml org.xmlcml.cml.crystaleye.lensfield.cml.CDX2CMLProcessor/run 2010-07-08T08:04:16+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(source cdx([aldehydes/intermediate0.cdx 2010-07-08T07:43:33+0100][aldehydes/intermediate1.cdx 2010-07-08T07:43:33+0100][aldehydes/intermediate2.cdx 2010-07-08T07:43:33+0100][aldehydes/intermediate3.cdx 2010-07-08T07:43:33+0100][co2/intermediate0.cdx 2010-07-08T07:44:01+0100][co2/intermediate1.cdx 2010-07-08T07:44:01+0100][co2/intermediate2.cdx 2010-07-08T07:44:01+0100][co2/intermediate3.cdx 2010-07-08T07:44:01+0100][ketones/intermediate0.cdx 2010-07-08T07:44:31+0100][ketones/intermediate1.cdx 2010-07-08T07:44:31+0100][ketones/intermediate2.cdx 2010-07-08T07:44:32+0100][ketones/intermediate3.cdx 2010-07-08T07:44:32+0100]))
+(op cml(in aldehydes/intermediate0.cdx)(out [aldehydes/intermediate0.raw.cml 2010-07-08T08:06:02+0100 * intermediate0 ** aldehydes/]))
+(op cml(in aldehydes/intermediate1.cdx)(out [aldehydes/intermediate1.raw.cml 2010-07-08T08:06:02+0100 * intermediate1 ** aldehydes/]))
+(op cml(in aldehydes/intermediate2.cdx)(out [aldehydes/intermediate2.raw.cml 2010-07-08T08:06:02+0100 * intermediate2 ** aldehydes/]))
+(op cml(in aldehydes/intermediate3.cdx)(out [aldehydes/intermediate3.raw.cml 2010-07-08T08:06:02+0100 * intermediate3 ** aldehydes/]))
+(op cml(in co2/intermediate0.cdx)(out [co2/intermediate0.raw.cml 2010-07-08T08:06:02+0100 * intermediate0 ** co2/]))
+(op cml(in co2/intermediate1.cdx)(out [co2/intermediate1.raw.cml 2010-07-08T08:06:02+0100 * intermediate1 ** co2/]))
+(op cml(in co2/intermediate2.cdx)(out [co2/intermediate2.raw.cml 2010-07-08T08:06:02+0100 * intermediate2 ** co2/]))
+(op cml(in co2/intermediate3.cdx)(out [co2/intermediate3.raw.cml 2010-07-08T08:06:02+0100 * intermediate3 ** co2/]))
+(op cml(in ketones/intermediate0.cdx)(out [ketones/intermediate0.raw.cml 2010-07-08T08:06:02+0100 * intermediate0 ** ketones/]))
+(op cml(in ketones/intermediate1.cdx)(out [ketones/intermediate1.raw.cml 2010-07-08T08:06:02+0100 * intermediate1 ** ketones/]))
+(op cml(in ketones/intermediate2.cdx)(out [ketones/intermediate2.raw.cml 2010-07-08T08:06:02+0100 * intermediate2 ** ketones/]))
+(op cml(in ketones/intermediate3.cdx)(out [ketones/intermediate3.raw.cml 2010-07-08T08:06:02+0100 * intermediate3 ** ketones/]))
+(op cleaned(in aldehydes/intermediate0.raw.cml)(out [aldehydes/intermediate0.cleaned.cml 2010-07-08T08:06:03+0100 * intermediate0 ** aldehydes/]))
+(op cleaned(in aldehydes/intermediate1.raw.cml)(out [aldehydes/intermediate1.cleaned.cml 2010-07-08T08:06:03+0100 * intermediate1 ** aldehydes/]))
+(op cleaned(in aldehydes/intermediate2.raw.cml)(out [aldehydes/intermediate2.cleaned.cml 2010-07-08T08:06:03+0100 * intermediate2 ** aldehydes/]))
+(op cleaned(in aldehydes/intermediate3.raw.cml)(out [aldehydes/intermediate3.cleaned.cml 2010-07-08T08:06:03+0100 * intermediate3 ** aldehydes/]))
+(op cleaned(in co2/intermediate0.raw.cml)(out [co2/intermediate0.cleaned.cml 2010-07-08T08:06:03+0100 * intermediate0 ** co2/]))
+(op cleaned(in co2/intermediate1.raw.cml)(out [co2/intermediate1.cleaned.cml 2010-07-08T08:06:03+0100 * intermediate1 ** co2/]))
+(op cleaned(in co2/intermediate2.raw.cml)(out [co2/intermediate2.cleaned.cml 2010-07-08T08:06:03+0100 * intermediate2 ** co2/]))
+(op cleaned(in co2/intermediate3.raw.cml)(out [co2/intermediate3.cleaned.cml 2010-07-08T08:06:03+0100 * intermediate3 ** co2/]))
+(op cleaned(in ketones/intermediate0.raw.cml)(out [ketones/intermediate0.cleaned.cml 2010-07-08T08:06:03+0100 * intermediate0 ** ketones/]))
+(op cleaned(in ketones/intermediate1.raw.cml)(out [ketones/intermediate1.cleaned.cml 2010-07-08T08:06:03+0100 * intermediate1 ** ketones/]))
+(op cleaned(in ketones/intermediate2.raw.cml)(out [ketones/intermediate2.cleaned.cml 2010-07-08T08:06:03+0100 * intermediate2 ** ketones/]))
+(op cleaned(in ketones/intermediate3.raw.cml)(out [ketones/intermediate3.cleaned.cml 2010-07-08T08:06:03+0100 * intermediate3 ** ketones/]))
+(build-finished 2010-07-08T08:06:03+0100)

orgtest1/.lf/log-20100708092438.txt

+(build-started 2010-07-08T09:24:35+0100)
+(task raw org.xmlcml.cml.crystaleye.lensfield.cml.CDX2CMLProcessor/run 2010-07-08T09:24:12+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task reactant0 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:24:12+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task cml org.xmlcml.cml.crystaleye.lensfield.cml.AttributeRemover/run 2010-07-08T09:24:12+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(source cdx([aldehydes/intermediate0.cdx 2010-07-08T07:43:33+0100][aldehydes/intermediate1.cdx 2010-07-08T07:43:33+0100][aldehydes/intermediate2.cdx 2010-07-08T07:43:33+0100][aldehydes/intermediate3.cdx 2010-07-08T07:43:33+0100][co2/intermediate0.cdx 2010-07-08T07:44:01+0100][co2/intermediate1.cdx 2010-07-08T07:44:01+0100][co2/intermediate2.cdx 2010-07-08T07:44:01+0100][co2/intermediate3.cdx 2010-07-08T07:44:01+0100][ketones/intermediate0.cdx 2010-07-08T07:44:31+0100][ketones/intermediate1.cdx 2010-07-08T07:44:31+0100][ketones/intermediate2.cdx 2010-07-08T07:44:32+0100][ketones/intermediate3.cdx 2010-07-08T07:44:32+0100]))
+(source int0())
+(op raw(in aldehydes/intermediate0.cdx)(out [aldehydes/intermediate0.raw.cml 2010-07-08T09:24:36+0100 * intermediate0 ** aldehydes/]))
+(op raw(in aldehydes/intermediate1.cdx)(out [aldehydes/intermediate1.raw.cml 2010-07-08T09:24:36+0100 * intermediate1 ** aldehydes/]))
+(op raw(in aldehydes/intermediate2.cdx)(out [aldehydes/intermediate2.raw.cml 2010-07-08T09:24:36+0100 * intermediate2 ** aldehydes/]))
+(op raw(in aldehydes/intermediate3.cdx)(out [aldehydes/intermediate3.raw.cml 2010-07-08T09:24:36+0100 * intermediate3 ** aldehydes/]))
+(op raw(in co2/intermediate0.cdx)(out [co2/intermediate0.raw.cml 2010-07-08T09:24:36+0100 * intermediate0 ** co2/]))
+(op raw(in co2/intermediate1.cdx)(out [co2/intermediate1.raw.cml 2010-07-08T09:24:36+0100 * intermediate1 ** co2/]))
+(op raw(in co2/intermediate2.cdx)(out [co2/intermediate2.raw.cml 2010-07-08T09:24:36+0100 * intermediate2 ** co2/]))
+(op raw(in co2/intermediate3.cdx)(out [co2/intermediate3.raw.cml 2010-07-08T09:24:36+0100 * intermediate3 ** co2/]))
+(op raw(in ketones/intermediate0.cdx)(out [ketones/intermediate0.raw.cml 2010-07-08T09:24:36+0100 * intermediate0 ** ketones/]))
+(op raw(in ketones/intermediate1.cdx)(out [ketones/intermediate1.raw.cml 2010-07-08T09:24:36+0100 * intermediate1 ** ketones/]))
+(op raw(in ketones/intermediate2.cdx)(out [ketones/intermediate2.raw.cml 2010-07-08T09:24:36+0100 * intermediate2 ** ketones/]))
+(op raw(in ketones/intermediate3.cdx)(out [ketones/intermediate3.raw.cml 2010-07-08T09:24:36+0100 * intermediate3 ** ketones/]))
+(op cml(in aldehydes/intermediate0.raw.cml)(out [aldehydes/intermediate0.cleaned.cml 2010-07-08T09:24:37+0100 * intermediate0 ** aldehydes/]))
+(op cml(in aldehydes/intermediate1.raw.cml)(out [aldehydes/intermediate1.cleaned.cml 2010-07-08T09:24:37+0100 * intermediate1 ** aldehydes/]))
+(op cml(in aldehydes/intermediate2.raw.cml)(out [aldehydes/intermediate2.cleaned.cml 2010-07-08T09:24:37+0100 * intermediate2 ** aldehydes/]))
+(op cml(in aldehydes/intermediate3.raw.cml)(out [aldehydes/intermediate3.cleaned.cml 2010-07-08T09:24:38+0100 * intermediate3 ** aldehydes/]))
+(op cml(in co2/intermediate0.raw.cml)(out [co2/intermediate0.cleaned.cml 2010-07-08T09:24:38+0100 * intermediate0 ** co2/]))
+(op cml(in co2/intermediate1.raw.cml)(out [co2/intermediate1.cleaned.cml 2010-07-08T09:24:38+0100 * intermediate1 ** co2/]))
+(op cml(in co2/intermediate2.raw.cml)(out [co2/intermediate2.cleaned.cml 2010-07-08T09:24:38+0100 * intermediate2 ** co2/]))
+(op cml(in co2/intermediate3.raw.cml)(out [co2/intermediate3.cleaned.cml 2010-07-08T09:24:38+0100 * intermediate3 ** co2/]))
+(op cml(in ketones/intermediate0.raw.cml)(out [ketones/intermediate0.cleaned.cml 2010-07-08T09:24:38+0100 * intermediate0 ** ketones/]))
+(op cml(in ketones/intermediate1.raw.cml)(out [ketones/intermediate1.cleaned.cml 2010-07-08T09:24:38+0100 * intermediate1 ** ketones/]))
+(op cml(in ketones/intermediate2.raw.cml)(out [ketones/intermediate2.cleaned.cml 2010-07-08T09:24:38+0100 * intermediate2 ** ketones/]))
+(op cml(in ketones/intermediate3.raw.cml)(out [ketones/intermediate3.cleaned.cml 2010-07-08T09:24:38+0100 * intermediate3 ** ketones/]))
+(op reactant0(in aldehydes/intermediate0.cleaned.cml)(out [aldehydes/step0/reactant.cml 2010-07-08T09:24:38+0100 * intermediate0 ** aldehydes/]))
+(op reactant0(in aldehydes/intermediate1.cleaned.cml)(out [aldehydes/step0/reactant.cml 2010-07-08T09:24:38+0100 * intermediate1 ** aldehydes/]))
+(op reactant0(in aldehydes/intermediate2.cleaned.cml)(out [aldehydes/step0/reactant.cml 2010-07-08T09:24:38+0100 * intermediate2 ** aldehydes/]))
+(op reactant0(in aldehydes/intermediate3.cleaned.cml)(out [aldehydes/step0/reactant.cml 2010-07-08T09:24:38+0100 * intermediate3 ** aldehydes/]))
+(op reactant0(in co2/intermediate0.cleaned.cml)(out [co2/step0/reactant.cml 2010-07-08T09:24:38+0100 * intermediate0 ** co2/]))
+(op reactant0(in co2/intermediate1.cleaned.cml)(out [co2/step0/reactant.cml 2010-07-08T09:24:38+0100 * intermediate1 ** co2/]))
+(op reactant0(in co2/intermediate2.cleaned.cml)(out [co2/step0/reactant.cml 2010-07-08T09:24:38+0100 * intermediate2 ** co2/]))
+(op reactant0(in co2/intermediate3.cleaned.cml)(out [co2/step0/reactant.cml 2010-07-08T09:24:38+0100 * intermediate3 ** co2/]))
+(op reactant0(in ketones/intermediate0.cleaned.cml)(out [ketones/step0/reactant.cml 2010-07-08T09:24:38+0100 * intermediate0 ** ketones/]))
+(op reactant0(in ketones/intermediate1.cleaned.cml)(out [ketones/step0/reactant.cml 2010-07-08T09:24:38+0100 * intermediate1 ** ketones/]))
+(op reactant0(in ketones/intermediate2.cleaned.cml)(out [ketones/step0/reactant.cml 2010-07-08T09:24:38+0100 * intermediate2 ** ketones/]))
+(op reactant0(in ketones/intermediate3.cleaned.cml)(out [ketones/step0/reactant.cml 2010-07-08T09:24:38+0100 * intermediate3 ** ketones/]))
+(build-finished 2010-07-08T09:24:38+0100)

orgtest1/.lf/log-20100708092721.txt

+(build-started 2010-07-08T09:27:18+0100)
+(task raw org.xmlcml.cml.crystaleye.lensfield.cml.CDX2CMLProcessor/run 2010-07-08T09:27:02+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task reactant0 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:27:02+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task cml org.xmlcml.cml.crystaleye.lensfield.cml.AttributeRemover/run 2010-07-08T09:27:02+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(source cdx([aldehydes/intermediate0.cdx 2010-07-08T07:43:33+0100][aldehydes/intermediate1.cdx 2010-07-08T07:43:33+0100][aldehydes/intermediate2.cdx 2010-07-08T07:43:33+0100][aldehydes/intermediate3.cdx 2010-07-08T07:43:33+0100][co2/intermediate0.cdx 2010-07-08T07:44:01+0100][co2/intermediate1.cdx 2010-07-08T07:44:01+0100][co2/intermediate2.cdx 2010-07-08T07:44:01+0100][co2/intermediate3.cdx 2010-07-08T07:44:01+0100][ketones/intermediate0.cdx 2010-07-08T07:44:31+0100][ketones/intermediate1.cdx 2010-07-08T07:44:31+0100][ketones/intermediate2.cdx 2010-07-08T07:44:32+0100][ketones/intermediate3.cdx 2010-07-08T07:44:32+0100]))
+(source int0())
+(op raw(in aldehydes/intermediate0.cdx)(out [aldehydes/intermediate0.raw.cml 2010-07-08T09:27:19+0100 * intermediate0 ** aldehydes/]))
+(op raw(in aldehydes/intermediate1.cdx)(out [aldehydes/intermediate1.raw.cml 2010-07-08T09:27:19+0100 * intermediate1 ** aldehydes/]))
+(op raw(in aldehydes/intermediate2.cdx)(out [aldehydes/intermediate2.raw.cml 2010-07-08T09:27:19+0100 * intermediate2 ** aldehydes/]))
+(op raw(in aldehydes/intermediate3.cdx)(out [aldehydes/intermediate3.raw.cml 2010-07-08T09:27:19+0100 * intermediate3 ** aldehydes/]))
+(op raw(in co2/intermediate0.cdx)(out [co2/intermediate0.raw.cml 2010-07-08T09:27:19+0100 * intermediate0 ** co2/]))
+(op raw(in co2/intermediate1.cdx)(out [co2/intermediate1.raw.cml 2010-07-08T09:27:19+0100 * intermediate1 ** co2/]))
+(op raw(in co2/intermediate2.cdx)(out [co2/intermediate2.raw.cml 2010-07-08T09:27:20+0100 * intermediate2 ** co2/]))
+(op raw(in co2/intermediate3.cdx)(out [co2/intermediate3.raw.cml 2010-07-08T09:27:20+0100 * intermediate3 ** co2/]))
+(op raw(in ketones/intermediate0.cdx)(out [ketones/intermediate0.raw.cml 2010-07-08T09:27:20+0100 * intermediate0 ** ketones/]))
+(op raw(in ketones/intermediate1.cdx)(out [ketones/intermediate1.raw.cml 2010-07-08T09:27:20+0100 * intermediate1 ** ketones/]))
+(op raw(in ketones/intermediate2.cdx)(out [ketones/intermediate2.raw.cml 2010-07-08T09:27:20+0100 * intermediate2 ** ketones/]))
+(op raw(in ketones/intermediate3.cdx)(out [ketones/intermediate3.raw.cml 2010-07-08T09:27:20+0100 * intermediate3 ** ketones/]))
+(op cml(in aldehydes/intermediate0.raw.cml)(out [aldehydes/intermediate0.cleaned.cml 2010-07-08T09:27:21+0100 * intermediate0 ** aldehydes/]))
+(op cml(in aldehydes/intermediate1.raw.cml)(out [aldehydes/intermediate1.cleaned.cml 2010-07-08T09:27:21+0100 * intermediate1 ** aldehydes/]))
+(op cml(in aldehydes/intermediate2.raw.cml)(out [aldehydes/intermediate2.cleaned.cml 2010-07-08T09:27:21+0100 * intermediate2 ** aldehydes/]))
+(op cml(in aldehydes/intermediate3.raw.cml)(out [aldehydes/intermediate3.cleaned.cml 2010-07-08T09:27:21+0100 * intermediate3 ** aldehydes/]))
+(op cml(in co2/intermediate0.raw.cml)(out [co2/intermediate0.cleaned.cml 2010-07-08T09:27:21+0100 * intermediate0 ** co2/]))
+(op cml(in co2/intermediate1.raw.cml)(out [co2/intermediate1.cleaned.cml 2010-07-08T09:27:21+0100 * intermediate1 ** co2/]))
+(op cml(in co2/intermediate2.raw.cml)(out [co2/intermediate2.cleaned.cml 2010-07-08T09:27:21+0100 * intermediate2 ** co2/]))
+(op cml(in co2/intermediate3.raw.cml)(out [co2/intermediate3.cleaned.cml 2010-07-08T09:27:21+0100 * intermediate3 ** co2/]))
+(op cml(in ketones/intermediate0.raw.cml)(out [ketones/intermediate0.cleaned.cml 2010-07-08T09:27:21+0100 * intermediate0 ** ketones/]))
+(op cml(in ketones/intermediate1.raw.cml)(out [ketones/intermediate1.cleaned.cml 2010-07-08T09:27:21+0100 * intermediate1 ** ketones/]))
+(op cml(in ketones/intermediate2.raw.cml)(out [ketones/intermediate2.cleaned.cml 2010-07-08T09:27:21+0100 * intermediate2 ** ketones/]))
+(op cml(in ketones/intermediate3.raw.cml)(out [ketones/intermediate3.cleaned.cml 2010-07-08T09:27:21+0100 * intermediate3 ** ketones/]))
+(op reactant0(in aldehydes/intermediate0.cleaned.cml)(out [aldehydes/step0/reactant.cml 2010-07-08T09:27:21+0100 * intermediate0 ** aldehydes/]))
+(op reactant0(in aldehydes/intermediate1.cleaned.cml)(out [aldehydes/step0/reactant.cml 2010-07-08T09:27:21+0100 * intermediate1 ** aldehydes/]))
+(op reactant0(in aldehydes/intermediate2.cleaned.cml)(out [aldehydes/step0/reactant.cml 2010-07-08T09:27:21+0100 * intermediate2 ** aldehydes/]))
+(op reactant0(in aldehydes/intermediate3.cleaned.cml)(out [aldehydes/step0/reactant.cml 2010-07-08T09:27:21+0100 * intermediate3 ** aldehydes/]))
+(op reactant0(in co2/intermediate0.cleaned.cml)(out [co2/step0/reactant.cml 2010-07-08T09:27:21+0100 * intermediate0 ** co2/]))
+(op reactant0(in co2/intermediate1.cleaned.cml)(out [co2/step0/reactant.cml 2010-07-08T09:27:21+0100 * intermediate1 ** co2/]))
+(op reactant0(in co2/intermediate2.cleaned.cml)(out [co2/step0/reactant.cml 2010-07-08T09:27:21+0100 * intermediate2 ** co2/]))
+(op reactant0(in co2/intermediate3.cleaned.cml)(out [co2/step0/reactant.cml 2010-07-08T09:27:21+0100 * intermediate3 ** co2/]))
+(op reactant0(in ketones/intermediate0.cleaned.cml)(out [ketones/step0/reactant.cml 2010-07-08T09:27:21+0100 * intermediate0 ** ketones/]))
+(op reactant0(in ketones/intermediate1.cleaned.cml)(out [ketones/step0/reactant.cml 2010-07-08T09:27:21+0100 * intermediate1 ** ketones/]))
+(op reactant0(in ketones/intermediate2.cleaned.cml)(out [ketones/step0/reactant.cml 2010-07-08T09:27:21+0100 * intermediate2 ** ketones/]))
+(op reactant0(in ketones/intermediate3.cleaned.cml)(out [ketones/step0/reactant.cml 2010-07-08T09:27:21+0100 * intermediate3 ** ketones/]))
+(build-finished 2010-07-08T09:27:21+0100)

orgtest1/.lf/log-20100708092806.txt

+(build-started 2010-07-08T09:28:02+0100)
+(task raw org.xmlcml.cml.crystaleye.lensfield.cml.CDX2CMLProcessor/run 2010-07-08T09:27:46+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task reactant0 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:27:46+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task cml org.xmlcml.cml.crystaleye.lensfield.cml.AttributeRemover/run 2010-07-08T09:27:46+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task product0 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:27:46+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(source cdx([aldehydes/intermediate0.cdx 2010-07-08T07:43:33+0100][aldehydes/intermediate1.cdx 2010-07-08T07:43:33+0100][aldehydes/intermediate2.cdx 2010-07-08T07:43:33+0100][aldehydes/intermediate3.cdx 2010-07-08T07:43:33+0100][co2/intermediate0.cdx 2010-07-08T07:44:01+0100][co2/intermediate1.cdx 2010-07-08T07:44:01+0100][co2/intermediate2.cdx 2010-07-08T07:44:01+0100][co2/intermediate3.cdx 2010-07-08T07:44:01+0100][ketones/intermediate0.cdx 2010-07-08T07:44:31+0100][ketones/intermediate1.cdx 2010-07-08T07:44:31+0100][ketones/intermediate2.cdx 2010-07-08T07:44:32+0100][ketones/intermediate3.cdx 2010-07-08T07:44:32+0100]))
+(source int0())
+(source int1())
+(source int2())
+(source int3())
+(source int4())
+(source int5())
+(source int6())
+(source int7())
+(op raw(in aldehydes/intermediate0.cdx)(out [aldehydes/intermediate0.raw.cml 2010-07-08T09:28:04+0100 * intermediate0 ** aldehydes/]))
+(op raw(in aldehydes/intermediate1.cdx)(out [aldehydes/intermediate1.raw.cml 2010-07-08T09:28:04+0100 * intermediate1 ** aldehydes/]))
+(op raw(in aldehydes/intermediate2.cdx)(out [aldehydes/intermediate2.raw.cml 2010-07-08T09:28:04+0100 * intermediate2 ** aldehydes/]))
+(op raw(in aldehydes/intermediate3.cdx)(out [aldehydes/intermediate3.raw.cml 2010-07-08T09:28:04+0100 * intermediate3 ** aldehydes/]))
+(op raw(in co2/intermediate0.cdx)(out [co2/intermediate0.raw.cml 2010-07-08T09:28:04+0100 * intermediate0 ** co2/]))
+(op raw(in co2/intermediate1.cdx)(out [co2/intermediate1.raw.cml 2010-07-08T09:28:04+0100 * intermediate1 ** co2/]))
+(op raw(in co2/intermediate2.cdx)(out [co2/intermediate2.raw.cml 2010-07-08T09:28:04+0100 * intermediate2 ** co2/]))
+(op raw(in co2/intermediate3.cdx)(out [co2/intermediate3.raw.cml 2010-07-08T09:28:05+0100 * intermediate3 ** co2/]))
+(op raw(in ketones/intermediate0.cdx)(out [ketones/intermediate0.raw.cml 2010-07-08T09:28:05+0100 * intermediate0 ** ketones/]))
+(op raw(in ketones/intermediate1.cdx)(out [ketones/intermediate1.raw.cml 2010-07-08T09:28:05+0100 * intermediate1 ** ketones/]))
+(op raw(in ketones/intermediate2.cdx)(out [ketones/intermediate2.raw.cml 2010-07-08T09:28:05+0100 * intermediate2 ** ketones/]))
+(op raw(in ketones/intermediate3.cdx)(out [ketones/intermediate3.raw.cml 2010-07-08T09:28:05+0100 * intermediate3 ** ketones/]))
+(op cml(in aldehydes/intermediate0.raw.cml)(out [aldehydes/intermediate0.cleaned.cml 2010-07-08T09:28:06+0100 * intermediate0 ** aldehydes/]))
+(op cml(in aldehydes/intermediate1.raw.cml)(out [aldehydes/intermediate1.cleaned.cml 2010-07-08T09:28:06+0100 * intermediate1 ** aldehydes/]))
+(op cml(in aldehydes/intermediate2.raw.cml)(out [aldehydes/intermediate2.cleaned.cml 2010-07-08T09:28:06+0100 * intermediate2 ** aldehydes/]))
+(op cml(in aldehydes/intermediate3.raw.cml)(out [aldehydes/intermediate3.cleaned.cml 2010-07-08T09:28:06+0100 * intermediate3 ** aldehydes/]))
+(op cml(in co2/intermediate0.raw.cml)(out [co2/intermediate0.cleaned.cml 2010-07-08T09:28:06+0100 * intermediate0 ** co2/]))
+(op cml(in co2/intermediate1.raw.cml)(out [co2/intermediate1.cleaned.cml 2010-07-08T09:28:06+0100 * intermediate1 ** co2/]))
+(op cml(in co2/intermediate2.raw.cml)(out [co2/intermediate2.cleaned.cml 2010-07-08T09:28:06+0100 * intermediate2 ** co2/]))
+(op cml(in co2/intermediate3.raw.cml)(out [co2/intermediate3.cleaned.cml 2010-07-08T09:28:06+0100 * intermediate3 ** co2/]))
+(op cml(in ketones/intermediate0.raw.cml)(out [ketones/intermediate0.cleaned.cml 2010-07-08T09:28:06+0100 * intermediate0 ** ketones/]))
+(op cml(in ketones/intermediate1.raw.cml)(out [ketones/intermediate1.cleaned.cml 2010-07-08T09:28:06+0100 * intermediate1 ** ketones/]))
+(op cml(in ketones/intermediate2.raw.cml)(out [ketones/intermediate2.cleaned.cml 2010-07-08T09:28:06+0100 * intermediate2 ** ketones/]))
+(op cml(in ketones/intermediate3.raw.cml)(out [ketones/intermediate3.cleaned.cml 2010-07-08T09:28:06+0100 * intermediate3 ** ketones/]))
+(build-finished 2010-07-08T09:28:06+0100)

orgtest1/.lf/log-20100708093042.txt

+(build-started 2010-07-08T09:30:39+0100)
+(task raw org.xmlcml.cml.crystaleye.lensfield.cml.CDX2CMLProcessor/run 2010-07-08T09:30:26+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task reactant0 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:30:26+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task cml org.xmlcml.cml.crystaleye.lensfield.cml.AttributeRemover/run 2010-07-08T09:30:26+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task product0 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:30:26+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(source cdx([aldehydes/intermediate0.cdx 2010-07-08T07:43:33+0100][aldehydes/intermediate1.cdx 2010-07-08T07:43:33+0100][aldehydes/intermediate2.cdx 2010-07-08T07:43:33+0100][aldehydes/intermediate3.cdx 2010-07-08T07:43:33+0100][co2/intermediate0.cdx 2010-07-08T07:44:01+0100][co2/intermediate1.cdx 2010-07-08T07:44:01+0100][co2/intermediate2.cdx 2010-07-08T07:44:01+0100][co2/intermediate3.cdx 2010-07-08T07:44:01+0100][ketones/intermediate0.cdx 2010-07-08T07:44:31+0100][ketones/intermediate1.cdx 2010-07-08T07:44:31+0100][ketones/intermediate2.cdx 2010-07-08T07:44:32+0100][ketones/intermediate3.cdx 2010-07-08T07:44:32+0100]))
+(source int0())
+(source int2())
+(source int3())
+(source int4())
+(source int5())
+(source int6())
+(source int7())
+(source int1())
+(op raw(in aldehydes/intermediate0.cdx)(out [aldehydes/intermediate0.raw.cml 2010-07-08T09:30:41+0100 * intermediate0 ** aldehydes/]))
+(op raw(in aldehydes/intermediate1.cdx)(out [aldehydes/intermediate1.raw.cml 2010-07-08T09:30:41+0100 * intermediate1 ** aldehydes/]))
+(op raw(in aldehydes/intermediate2.cdx)(out [aldehydes/intermediate2.raw.cml 2010-07-08T09:30:41+0100 * intermediate2 ** aldehydes/]))
+(op raw(in aldehydes/intermediate3.cdx)(out [aldehydes/intermediate3.raw.cml 2010-07-08T09:30:41+0100 * intermediate3 ** aldehydes/]))
+(op raw(in co2/intermediate0.cdx)(out [co2/intermediate0.raw.cml 2010-07-08T09:30:41+0100 * intermediate0 ** co2/]))
+(op raw(in co2/intermediate1.cdx)(out [co2/intermediate1.raw.cml 2010-07-08T09:30:41+0100 * intermediate1 ** co2/]))
+(op raw(in co2/intermediate2.cdx)(out [co2/intermediate2.raw.cml 2010-07-08T09:30:41+0100 * intermediate2 ** co2/]))
+(op raw(in co2/intermediate3.cdx)(out [co2/intermediate3.raw.cml 2010-07-08T09:30:41+0100 * intermediate3 ** co2/]))
+(op raw(in ketones/intermediate0.cdx)(out [ketones/intermediate0.raw.cml 2010-07-08T09:30:41+0100 * intermediate0 ** ketones/]))
+(op raw(in ketones/intermediate1.cdx)(out [ketones/intermediate1.raw.cml 2010-07-08T09:30:41+0100 * intermediate1 ** ketones/]))
+(op raw(in ketones/intermediate2.cdx)(out [ketones/intermediate2.raw.cml 2010-07-08T09:30:41+0100 * intermediate2 ** ketones/]))
+(op raw(in ketones/intermediate3.cdx)(out [ketones/intermediate3.raw.cml 2010-07-08T09:30:41+0100 * intermediate3 ** ketones/]))
+(op cml(in aldehydes/intermediate0.raw.cml)(out [aldehydes/intermediate0.cleaned.cml 2010-07-08T09:30:42+0100 * intermediate0 ** aldehydes/]))
+(op cml(in aldehydes/intermediate1.raw.cml)(out [aldehydes/intermediate1.cleaned.cml 2010-07-08T09:30:42+0100 * intermediate1 ** aldehydes/]))
+(op cml(in aldehydes/intermediate2.raw.cml)(out [aldehydes/intermediate2.cleaned.cml 2010-07-08T09:30:42+0100 * intermediate2 ** aldehydes/]))
+(op cml(in aldehydes/intermediate3.raw.cml)(out [aldehydes/intermediate3.cleaned.cml 2010-07-08T09:30:42+0100 * intermediate3 ** aldehydes/]))
+(op cml(in co2/intermediate0.raw.cml)(out [co2/intermediate0.cleaned.cml 2010-07-08T09:30:42+0100 * intermediate0 ** co2/]))
+(op cml(in co2/intermediate1.raw.cml)(out [co2/intermediate1.cleaned.cml 2010-07-08T09:30:42+0100 * intermediate1 ** co2/]))
+(op cml(in co2/intermediate2.raw.cml)(out [co2/intermediate2.cleaned.cml 2010-07-08T09:30:42+0100 * intermediate2 ** co2/]))
+(op cml(in co2/intermediate3.raw.cml)(out [co2/intermediate3.cleaned.cml 2010-07-08T09:30:42+0100 * intermediate3 ** co2/]))
+(op cml(in ketones/intermediate0.raw.cml)(out [ketones/intermediate0.cleaned.cml 2010-07-08T09:30:42+0100 * intermediate0 ** ketones/]))
+(op cml(in ketones/intermediate1.raw.cml)(out [ketones/intermediate1.cleaned.cml 2010-07-08T09:30:42+0100 * intermediate1 ** ketones/]))
+(op cml(in ketones/intermediate2.raw.cml)(out [ketones/intermediate2.cleaned.cml 2010-07-08T09:30:42+0100 * intermediate2 ** ketones/]))
+(op cml(in ketones/intermediate3.raw.cml)(out [ketones/intermediate3.cleaned.cml 2010-07-08T09:30:42+0100 * intermediate3 ** ketones/]))
+(build-finished 2010-07-08T09:30:42+0100)

orgtest1/.lf/log-20100708093334.txt

+(build-started 2010-07-08T09:33:31+0100)
+(task raw org.xmlcml.cml.crystaleye.lensfield.cml.CDX2CMLProcessor/run 2010-07-08T09:33:16+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task reactant0 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:33:16+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task cml org.xmlcml.cml.crystaleye.lensfield.cml.AttributeRemover/run 2010-07-08T09:33:16+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task product0 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:33:16+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(source cdx([aldehydes/intermediate0.cdx 2010-07-08T07:43:33+0100][aldehydes/intermediate1.cdx 2010-07-08T07:43:33+0100][aldehydes/intermediate2.cdx 2010-07-08T07:43:33+0100][aldehydes/intermediate3.cdx 2010-07-08T07:43:33+0100][co2/intermediate0.cdx 2010-07-08T07:44:01+0100][co2/intermediate1.cdx 2010-07-08T07:44:01+0100][co2/intermediate2.cdx 2010-07-08T07:44:01+0100][co2/intermediate3.cdx 2010-07-08T07:44:01+0100][ketones/intermediate0.cdx 2010-07-08T07:44:31+0100][ketones/intermediate1.cdx 2010-07-08T07:44:31+0100][ketones/intermediate2.cdx 2010-07-08T07:44:32+0100][ketones/intermediate3.cdx 2010-07-08T07:44:32+0100]))
+(source int0())
+(source int1())
+(source int2())
+(source int3())
+(source int4())
+(source int5())
+(source int6())
+(source int7())
+(op raw(in aldehydes/intermediate0.cdx)(out [aldehydes/intermediate0.raw.cml 2010-07-08T09:33:32+0100 * intermediate0 ** aldehydes/]))
+(op raw(in aldehydes/intermediate1.cdx)(out [aldehydes/intermediate1.raw.cml 2010-07-08T09:33:32+0100 * intermediate1 ** aldehydes/]))
+(op raw(in aldehydes/intermediate2.cdx)(out [aldehydes/intermediate2.raw.cml 2010-07-08T09:33:32+0100 * intermediate2 ** aldehydes/]))
+(op raw(in aldehydes/intermediate3.cdx)(out [aldehydes/intermediate3.raw.cml 2010-07-08T09:33:32+0100 * intermediate3 ** aldehydes/]))
+(op raw(in co2/intermediate0.cdx)(out [co2/intermediate0.raw.cml 2010-07-08T09:33:32+0100 * intermediate0 ** co2/]))
+(op raw(in co2/intermediate1.cdx)(out [co2/intermediate1.raw.cml 2010-07-08T09:33:32+0100 * intermediate1 ** co2/]))
+(op raw(in co2/intermediate2.cdx)(out [co2/intermediate2.raw.cml 2010-07-08T09:33:32+0100 * intermediate2 ** co2/]))
+(op raw(in co2/intermediate3.cdx)(out [co2/intermediate3.raw.cml 2010-07-08T09:33:32+0100 * intermediate3 ** co2/]))
+(op raw(in ketones/intermediate0.cdx)(out [ketones/intermediate0.raw.cml 2010-07-08T09:33:33+0100 * intermediate0 ** ketones/]))
+(op raw(in ketones/intermediate1.cdx)(out [ketones/intermediate1.raw.cml 2010-07-08T09:33:33+0100 * intermediate1 ** ketones/]))
+(op raw(in ketones/intermediate2.cdx)(out [ketones/intermediate2.raw.cml 2010-07-08T09:33:33+0100 * intermediate2 ** ketones/]))
+(op raw(in ketones/intermediate3.cdx)(out [ketones/intermediate3.raw.cml 2010-07-08T09:33:33+0100 * intermediate3 ** ketones/]))
+(op cml(in aldehydes/intermediate0.raw.cml)(out [aldehydes/intermediate0.cleaned.cml 2010-07-08T09:33:34+0100 * intermediate0 ** aldehydes/]))
+(op cml(in aldehydes/intermediate1.raw.cml)(out [aldehydes/intermediate1.cleaned.cml 2010-07-08T09:33:34+0100 * intermediate1 ** aldehydes/]))
+(op cml(in aldehydes/intermediate2.raw.cml)(out [aldehydes/intermediate2.cleaned.cml 2010-07-08T09:33:34+0100 * intermediate2 ** aldehydes/]))
+(op cml(in aldehydes/intermediate3.raw.cml)(out [aldehydes/intermediate3.cleaned.cml 2010-07-08T09:33:34+0100 * intermediate3 ** aldehydes/]))
+(op cml(in co2/intermediate0.raw.cml)(out [co2/intermediate0.cleaned.cml 2010-07-08T09:33:34+0100 * intermediate0 ** co2/]))
+(op cml(in co2/intermediate1.raw.cml)(out [co2/intermediate1.cleaned.cml 2010-07-08T09:33:34+0100 * intermediate1 ** co2/]))
+(op cml(in co2/intermediate2.raw.cml)(out [co2/intermediate2.cleaned.cml 2010-07-08T09:33:34+0100 * intermediate2 ** co2/]))
+(op cml(in co2/intermediate3.raw.cml)(out [co2/intermediate3.cleaned.cml 2010-07-08T09:33:34+0100 * intermediate3 ** co2/]))
+(op cml(in ketones/intermediate0.raw.cml)(out [ketones/intermediate0.cleaned.cml 2010-07-08T09:33:34+0100 * intermediate0 ** ketones/]))
+(op cml(in ketones/intermediate1.raw.cml)(out [ketones/intermediate1.cleaned.cml 2010-07-08T09:33:34+0100 * intermediate1 ** ketones/]))
+(op cml(in ketones/intermediate2.raw.cml)(out [ketones/intermediate2.cleaned.cml 2010-07-08T09:33:34+0100 * intermediate2 ** ketones/]))
+(op cml(in ketones/intermediate3.raw.cml)(out [ketones/intermediate3.cleaned.cml 2010-07-08T09:33:34+0100 * intermediate3 ** ketones/]))
+(build-finished 2010-07-08T09:33:34+0100)

orgtest1/.lf/log-20100708093438.txt

+(build-started 2010-07-08T09:34:34+0100)
+(task raw org.xmlcml.cml.crystaleye.lensfield.cml.CDX2CMLProcessor/run 2010-07-08T09:34:19+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task reactant0 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:34:19+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task cml org.xmlcml.cml.crystaleye.lensfield.cml.AttributeRemover/run 2010-07-08T09:34:19+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task product0 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:34:19+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(source cdx([aldehydes/intermediate0.cdx 2010-07-08T07:43:33+0100][aldehydes/intermediate1.cdx 2010-07-08T07:43:33+0100][aldehydes/intermediate2.cdx 2010-07-08T07:43:33+0100][aldehydes/intermediate3.cdx 2010-07-08T07:43:33+0100][co2/intermediate0.cdx 2010-07-08T07:44:01+0100][co2/intermediate1.cdx 2010-07-08T07:44:01+0100][co2/intermediate2.cdx 2010-07-08T07:44:01+0100][co2/intermediate3.cdx 2010-07-08T07:44:01+0100][ketones/intermediate0.cdx 2010-07-08T07:44:31+0100][ketones/intermediate1.cdx 2010-07-08T07:44:31+0100][ketones/intermediate2.cdx 2010-07-08T07:44:32+0100][ketones/intermediate3.cdx 2010-07-08T07:44:32+0100]))
+(source int0([aldehydes/intermediate0.cleaned.cml 2010-07-08T09:33:34+0100][co2/intermediate0.cleaned.cml 2010-07-08T09:33:34+0100][ketones/intermediate0.cleaned.cml 2010-07-08T09:33:34+0100]))
+(source int1([aldehydes/intermediate1.cleaned.cml 2010-07-08T09:33:34+0100][co2/intermediate1.cleaned.cml 2010-07-08T09:33:34+0100][ketones/intermediate1.cleaned.cml 2010-07-08T09:33:34+0100]))
+(source int2([aldehydes/intermediate2.cleaned.cml 2010-07-08T09:33:34+0100][co2/intermediate2.cleaned.cml 2010-07-08T09:33:34+0100][ketones/intermediate2.cleaned.cml 2010-07-08T09:33:34+0100]))
+(source int3([aldehydes/intermediate3.cleaned.cml 2010-07-08T09:33:34+0100][co2/intermediate3.cleaned.cml 2010-07-08T09:33:34+0100][ketones/intermediate3.cleaned.cml 2010-07-08T09:33:34+0100]))
+(source int4())
+(source int5())
+(source int6())
+(source int7())
+(op raw(in aldehydes/intermediate0.cdx)(out [aldehydes/intermediate0.raw.cml 2010-07-08T09:34:36+0100 * intermediate0 ** aldehydes/]))
+(op raw(in aldehydes/intermediate1.cdx)(out [aldehydes/intermediate1.raw.cml 2010-07-08T09:34:36+0100 * intermediate1 ** aldehydes/]))
+(op raw(in aldehydes/intermediate2.cdx)(out [aldehydes/intermediate2.raw.cml 2010-07-08T09:34:36+0100 * intermediate2 ** aldehydes/]))
+(op raw(in aldehydes/intermediate3.cdx)(out [aldehydes/intermediate3.raw.cml 2010-07-08T09:34:36+0100 * intermediate3 ** aldehydes/]))
+(op raw(in co2/intermediate0.cdx)(out [co2/intermediate0.raw.cml 2010-07-08T09:34:36+0100 * intermediate0 ** co2/]))
+(op raw(in co2/intermediate1.cdx)(out [co2/intermediate1.raw.cml 2010-07-08T09:34:36+0100 * intermediate1 ** co2/]))
+(op raw(in co2/intermediate2.cdx)(out [co2/intermediate2.raw.cml 2010-07-08T09:34:36+0100 * intermediate2 ** co2/]))
+(op raw(in co2/intermediate3.cdx)(out [co2/intermediate3.raw.cml 2010-07-08T09:34:37+0100 * intermediate3 ** co2/]))
+(op raw(in ketones/intermediate0.cdx)(out [ketones/intermediate0.raw.cml 2010-07-08T09:34:37+0100 * intermediate0 ** ketones/]))
+(op raw(in ketones/intermediate1.cdx)(out [ketones/intermediate1.raw.cml 2010-07-08T09:34:37+0100 * intermediate1 ** ketones/]))
+(op raw(in ketones/intermediate2.cdx)(out [ketones/intermediate2.raw.cml 2010-07-08T09:34:37+0100 * intermediate2 ** ketones/]))
+(op raw(in ketones/intermediate3.cdx)(out [ketones/intermediate3.raw.cml 2010-07-08T09:34:37+0100 * intermediate3 ** ketones/]))
+(op reactant0(in aldehydes/intermediate0.cleaned.cml)(out [aldehydes/step0/reactant.cml 2010-07-08T09:34:37+0100 ** aldehydes/]))
+(op reactant0(in co2/intermediate0.cleaned.cml)(out [co2/step0/reactant.cml 2010-07-08T09:34:37+0100 ** co2/]))
+(op reactant0(in ketones/intermediate0.cleaned.cml)(out [ketones/step0/reactant.cml 2010-07-08T09:34:37+0100 ** ketones/]))
+(op product0(in aldehydes/intermediate1.cleaned.cml)(out [aldehydes/step0/product.cml 2010-07-08T09:34:37+0100 ** aldehydes/]))
+(op product0(in co2/intermediate1.cleaned.cml)(out [co2/step0/product.cml 2010-07-08T09:34:37+0100 ** co2/]))
+(op product0(in ketones/intermediate1.cleaned.cml)(out [ketones/step0/product.cml 2010-07-08T09:34:37+0100 ** ketones/]))
+(op cml(in aldehydes/intermediate0.raw.cml)(out [aldehydes/intermediate0.cleaned.cml 2010-07-08T09:34:38+0100 * intermediate0 ** aldehydes/]))
+(op cml(in aldehydes/intermediate1.raw.cml)(out [aldehydes/intermediate1.cleaned.cml 2010-07-08T09:34:38+0100 * intermediate1 ** aldehydes/]))
+(op cml(in aldehydes/intermediate2.raw.cml)(out [aldehydes/intermediate2.cleaned.cml 2010-07-08T09:34:38+0100 * intermediate2 ** aldehydes/]))
+(op cml(in aldehydes/intermediate3.raw.cml)(out [aldehydes/intermediate3.cleaned.cml 2010-07-08T09:34:38+0100 * intermediate3 ** aldehydes/]))
+(op cml(in co2/intermediate0.raw.cml)(out [co2/intermediate0.cleaned.cml 2010-07-08T09:34:38+0100 * intermediate0 ** co2/]))
+(op cml(in co2/intermediate1.raw.cml)(out [co2/intermediate1.cleaned.cml 2010-07-08T09:34:38+0100 * intermediate1 ** co2/]))
+(op cml(in co2/intermediate2.raw.cml)(out [co2/intermediate2.cleaned.cml 2010-07-08T09:34:38+0100 * intermediate2 ** co2/]))
+(op cml(in co2/intermediate3.raw.cml)(out [co2/intermediate3.cleaned.cml 2010-07-08T09:34:38+0100 * intermediate3 ** co2/]))
+(op cml(in ketones/intermediate0.raw.cml)(out [ketones/intermediate0.cleaned.cml 2010-07-08T09:34:38+0100 * intermediate0 ** ketones/]))
+(op cml(in ketones/intermediate1.raw.cml)(out [ketones/intermediate1.cleaned.cml 2010-07-08T09:34:38+0100 * intermediate1 ** ketones/]))
+(op cml(in ketones/intermediate2.raw.cml)(out [ketones/intermediate2.cleaned.cml 2010-07-08T09:34:38+0100 * intermediate2 ** ketones/]))
+(op cml(in ketones/intermediate3.raw.cml)(out [ketones/intermediate3.cleaned.cml 2010-07-08T09:34:38+0100 * intermediate3 ** ketones/]))
+(build-finished 2010-07-08T09:34:38+0100)

orgtest1/.lf/log-20100708094602.txt

+(build-started 2010-07-08T09:46:00+0100)
+(task reactant3 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:45:44+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task reactant2 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:45:44+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task reactant1 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:45:44+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task reactant0 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:45:44+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task reactant6 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:45:44+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task reactant5 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:45:44+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task reactant4 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:45:44+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task product4 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:45:44+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task product3 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:45:44+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task product6 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:45:44+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task product5 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:45:44+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task product0 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:45:44+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task product2 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:45:44+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task product1 org.xmlcml.cml.crystaleye.lensfield.CopyProcessor/run 2010-07-08T09:45:44+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(source int0([aldehydes/intermediate0.cleaned.cml 2010-07-08T09:34:38+0100][co2/intermediate0.cleaned.cml 2010-07-08T09:34:38+0100][ketones/intermediate0.cleaned.cml 2010-07-08T09:34:38+0100]))
+(source int1([aldehydes/intermediate1.cleaned.cml 2010-07-08T09:34:38+0100][co2/intermediate1.cleaned.cml 2010-07-08T09:34:38+0100][ketones/intermediate1.cleaned.cml 2010-07-08T09:34:38+0100]))
+(source int2([aldehydes/intermediate2.cleaned.cml 2010-07-08T09:34:38+0100][co2/intermediate2.cleaned.cml 2010-07-08T09:34:38+0100][ketones/intermediate2.cleaned.cml 2010-07-08T09:34:38+0100]))
+(source int3([aldehydes/intermediate3.cleaned.cml 2010-07-08T09:34:38+0100][co2/intermediate3.cleaned.cml 2010-07-08T09:34:38+0100][ketones/intermediate3.cleaned.cml 2010-07-08T09:34:38+0100]))
+(source int4())
+(source int5())
+(source int6())
+(source int7())
+(op reactant0(in aldehydes/intermediate0.cleaned.cml)(out [aldehydes/step0/reactant.cml 2010-07-08T09:46:00+0100 ** aldehydes/]))
+(op reactant0(in co2/intermediate0.cleaned.cml)(out [co2/step0/reactant.cml 2010-07-08T09:46:00+0100 ** co2/]))
+(op reactant0(in ketones/intermediate0.cleaned.cml)(out [ketones/step0/reactant.cml 2010-07-08T09:46:00+0100 ** ketones/]))
+(op product0(in aldehydes/intermediate1.cleaned.cml)(out [aldehydes/step0/product.cml 2010-07-08T09:46:00+0100 ** aldehydes/]))
+(op product0(in co2/intermediate1.cleaned.cml)(out [co2/step0/product.cml 2010-07-08T09:46:00+0100 ** co2/]))
+(op product0(in ketones/intermediate1.cleaned.cml)(out [ketones/step0/product.cml 2010-07-08T09:46:01+0100 ** ketones/]))
+(op reactant1(in aldehydes/intermediate1.cleaned.cml)(out [aldehydes/step1/reactant.cml 2010-07-08T09:46:01+0100 ** aldehydes/]))
+(op reactant1(in co2/intermediate1.cleaned.cml)(out [co2/step1/reactant.cml 2010-07-08T09:46:01+0100 ** co2/]))
+(op reactant1(in ketones/intermediate1.cleaned.cml)(out [ketones/step1/reactant.cml 2010-07-08T09:46:01+0100 ** ketones/]))
+(op product1(in aldehydes/intermediate2.cleaned.cml)(out [aldehydes/step1/product.cml 2010-07-08T09:46:01+0100 ** aldehydes/]))
+(op product1(in co2/intermediate2.cleaned.cml)(out [co2/step1/product.cml 2010-07-08T09:46:01+0100 ** co2/]))
+(op product1(in ketones/intermediate2.cleaned.cml)(out [ketones/step1/product.cml 2010-07-08T09:46:01+0100 ** ketones/]))
+(op reactant2(in aldehydes/intermediate2.cleaned.cml)(out [aldehydes/step2/reactant.cml 2010-07-08T09:46:01+0100 ** aldehydes/]))
+(op reactant2(in co2/intermediate2.cleaned.cml)(out [co2/step2/reactant.cml 2010-07-08T09:46:01+0100 ** co2/]))
+(op reactant2(in ketones/intermediate2.cleaned.cml)(out [ketones/step2/reactant.cml 2010-07-08T09:46:01+0100 ** ketones/]))
+(op product2(in aldehydes/intermediate3.cleaned.cml)(out [aldehydes/step2/product.cml 2010-07-08T09:46:01+0100 ** aldehydes/]))
+(op product2(in co2/intermediate3.cleaned.cml)(out [co2/step2/product.cml 2010-07-08T09:46:01+0100 ** co2/]))
+(op product2(in ketones/intermediate3.cleaned.cml)(out [ketones/step2/product.cml 2010-07-08T09:46:01+0100 ** ketones/]))
+(op reactant3(in aldehydes/intermediate3.cleaned.cml)(out [aldehydes/step3/reactant.cml 2010-07-08T09:46:01+0100 ** aldehydes/]))
+(op reactant3(in co2/intermediate3.cleaned.cml)(out [co2/step3/reactant.cml 2010-07-08T09:46:02+0100 ** co2/]))
+(op reactant3(in ketones/intermediate3.cleaned.cml)(out [ketones/step3/reactant.cml 2010-07-08T09:46:02+0100 ** ketones/]))
+(build-finished 2010-07-08T09:46:02+0100)

orgtest1/.lf/log.txt

+(build-started 2010-07-08T15:06:14+0100)
+(task electron org.xmlcml.cml.crystaleye.lensfield.cml.ElectronCounter/run 2010-07-08T15:05:12+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task map org.xmlcml.cml.crystaleye.lensfield.cml.ReactionMap/run 2010-07-08T15:05:12+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(task cmllite org.xmlcml.cml.crystaleye.lensfield.cml.CML2CMLLiteProcessor/run 2010-07-08T15:05:12+0100 (params ) (depends [cml:curly-arrows:jar:1.0-SNAPSHOT 2010-07-05T10:26:15+0100][org.lensfield:lensfield2-api:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][log4j:log4j:jar:1.2.13 2010-02-03T15:25:41+0000][xom:xom:jar:1.1 2010-02-03T15:25:41+0000][xerces:xmlParserAPIs:jar:2.6.2 2010-02-03T15:25:40+0000][xerces:xercesImpl:jar:2.6.2 2010-02-03T15:31:03+0000][xalan:xalan:jar:2.7.0 2010-02-03T15:25:41+0000][xml-apis:xml-apis:jar:1.0.b2 2010-02-03T15:31:03+0000][jaxen:jaxen:jar:1.1-beta-8 2010-02-03T15:25:40+0000][dom4j:dom4j:jar:1.6.1 2010-02-03T15:25:40+0000][jdom:jdom:jar:1.0 2010-02-03T15:25:40+0000][cml:cmlxom:jar:2.5.1-SNAPSHOT 2010-07-07T11:30:34+0100][commons-io:commons-io:jar:1.4 2010-02-03T15:25:41+0000][org.apache.commons:commons-math:jar:2.0 2010-02-03T15:27:49+0000][cml:jumbo:jar:5.5.1-SNAPSHOT 2010-07-07T12:00:56+0100][cml:jumbo-converters-core:jar:0.3-SNAPSHOT 2010-07-07T10:51:04+0100][jtidy:jtidy:jar:4aug2000r7-dev 2010-02-03T15:30:41+0000][cml:jumbo-converters-chemdraw:jar:0.3-SNAPSHOT 2010-07-07T10:51:15+0100][cml:chemdraw-converter:jar:0.2-SNAPSHOT 2010-07-08T08:04:33+0100][pmr:crystaleye-lensfield:jar:0.1-SNAPSHOT 2010-07-07T12:28:43+0100][xml-apis:xml-apis:jar:1.3.03 2010-02-03T15:25:41+0000][xerces:xercesImpl:jar:2.8.0 2010-02-03T15:25:42+0000][cml:jumbo-converters-cif:jar:0.4-SNAPSHOT 2010-07-07T10:51:12+0100][cdk:cdk:jar:20071025 2010-02-03T15:30:38+0000][cml:cifxml:jar:1.3-SNAPSHOT 2010-07-05T15:31:26+0100][commons-httpclient:commons-httpclient:jar:3.1 2010-02-03T15:30:42+0000][commons-logging:commons-logging:jar:1.0.4 2010-02-03T15:30:43+0000][commons-codec:commons-codec:jar:1.2 2010-02-03T15:30:44+0000][org.freemarker:freemarker:jar:2.3.9 2010-02-03T15:30:46+0000][jgrapht:jgrapht:jar:0.6.0 2010-02-03T15:30:39+0000][javax:vecmath:jar:1.2 2010-02-03T15:30:40+0000][cml:jumbo-converters-graphics:jar:0.3-SNAPSHOT 2010-07-07T10:51:50+0100][cml:jumbo-converters-molecule:jar:0.3-SNAPSHOT 2010-07-07T10:51:45+0100][cml:jumbo-converters-testutils:jar:0.3-SNAPSHOT 2010-07-07T10:51:06+0100][junit:junit:jar:4.7 2010-02-03T15:26:50+0000][cml:jumbo-testutil:jar:1.0-SNAPSHOT 2010-07-08T08:05:14+0100][com.hp.hpl.jena:jena:jar:2.6.2 2010-02-03T15:31:22+0000][com.hp.hpl.jena:iri:jar:0.7 2010-02-03T15:31:23+0000][com.ibm.icu:icu4j:jar:3.4.4 2010-02-03T15:31:24+0000][org.slf4j:slf4j-api:jar:1.5.6 2010-02-03T15:31:24+0000][org.slf4j:slf4j-log4j12:jar:1.5.6 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-data:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-core:jar:1.2.0 2010-02-03T15:31:25+0000][org.openscience.cdk:cdk-interfaces:jar:1.2.0 2010-02-03T15:31:26+0000][java3d:vecmath:jar:1.3.1 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-annotation:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-render:jar:1.2.0 2010-02-03T15:31:27+0000][org.openscience.cdk:cdk-standard:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-sdg:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-io:jar:1.2.0 2010-02-03T15:31:28+0000][org.openscience.cdk:cdk-ioformats:jar:1.2.0 2010-02-03T15:31:29+0000][org.openscience.cdk:cdk-atomtype:jar:1.2.0 2010-02-03T15:31:29+0000][xpp3:xpp3:jar:1.1.4c 2010-02-03T15:31:30+0000][org.openscience.cdk:cdk-valencycheck:jar:1.2.0 2010-02-03T15:31:30+0000][uk.ac.cam.ch.osra-runner:osra-runner:jar:1.0-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-proc:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-deploy:jar:0.3-SNAPSHOT 2010-07-08T08:05:15+0100][net.sf.jnati:jnati-core:jar:0.3-SNAPSHOT 2010-07-08T08:05:16+0100][sea36.util:util-config:jar:0.1 2010-02-03T15:27:49+0000][uk.ac.cam.ch.osra-runner:osra-windows-x86:jar:1.0-SNAPSHOT 2010-07-08T08:05:35+0100][cml:jumbo-converters-rdf:jar:0.3-SNAPSHOT 2010-07-07T10:51:28+0100][org.slf4j:slf4j-log4j13:jar:1.0.1 2010-02-03T15:59:13+0000][owlapi:owlapi:jar:2.2.0 2010-02-03T15:30:54+0000][wwmm:crystaleye-harvesters:jar:0.2-SNAPSHOT 2010-07-08T08:05:36+0100][uk.ac.cam.ch.atomxom:atomxom-feeds:jar:0.1-SNAPSHOT 2010-07-07T10:41:22+0100][uk.ac.cam.ch.atomxom:atomxom-core:jar:0.1-SNAPSHOT 2010-07-07T10:41:23+0100][joda-time:joda-time:jar:1.6 2010-03-25T17:32:33+0000][org.apache.httpcomponents:httpclient:jar:4.0 2010-03-25T17:32:39+0000][org.apache.httpcomponents:httpcore:jar:4.0.1 2010-03-25T17:32:43+0000][net.jcip:jcip-annotations:jar:1.0 2010-03-25T17:32:52+0000][commons-cli:commons-cli:jar:1.0 2010-02-03T15:41:38+0000][commons-lang:commons-lang:jar:2.4 2010-02-08T17:11:16+0000][commons-collections:commons-collections:jar:3.2.1 2010-04-07T22:52:13+0100][chemicalTagger:chemicalTagger:jar:0.0.1-SNAPSHOT 2010-07-08T08:05:42+0100][log4j:apache-log4j-extras:jar:1.0 2010-04-21T14:26:25+0100][org.antlr:antlr-runtime:jar:3.2 2010-02-03T15:31:00+0000][org.antlr:stringtemplate:jar:3.2 2010-02-03T15:31:01+0000][antlr:antlr:jar:2.7.7 2010-02-03T20:04:42+0000][commons-configuration:commons-configuration:jar:1.3 2010-04-21T14:26:27+0100][commons-logging:commons-logging-api:jar:1.0.4 2010-04-21T14:26:28+0100][commons-digester:commons-digester:jar:1.6 2010-04-21T14:26:29+0100][commons-beanutils:commons-beanutils:jar:1.6 2010-04-21T14:26:30+0100][commons-beanutils:commons-beanutils-core:jar:1.7.0 2010-04-21T14:26:31+0100][commons-jxpath:commons-jxpath:jar:1.2 2010-04-21T14:26:31+0100][javax.servlet:servlet-api:jar:2.2 2010-04-21T14:26:32+0100][ant:ant-optional:jar:1.5.1 2010-04-21T14:26:33+0100][jdom:jdom:jar:b9 2010-04-21T14:26:33+0100][wwmm:oscar3:jar:1.0-SNAPSHOT 2010-07-08T08:05:57+0100][dk.brics:automaton:jar:1.11-3 2010-07-07T10:41:23+0100][cdk:cdk-nodeps:jar:1.0.1 2010-02-09T22:42:22+0000][commons-fileupload:commons-fileupload:jar:1.2 2010-02-08T17:11:15+0000][commons-math:commons-math:jar:1.2 2010-02-08T17:11:16+0000][commons-net:commons-net:jar:1.4.1 2010-02-08T17:11:17+0000][oro:oro:jar:2.0.8 2010-02-08T17:11:19+0000][jama:jama:jar:1.0.2 2010-02-08T17:11:19+0000][org.mortbay.jetty:jetty:jar:6.1.11 2010-02-08T17:11:20+0000][org.mortbay.jetty:jetty-util:jar:6.1.11 2010-02-08T17:11:21+0000][org.mortbay.jetty:servlet-api-2.5:jar:6.1.11 2010-02-08T17:11:23+0000][net.sf:jniinchi:jar:0.5 2010-02-03T15:27:51+0000][jregex:jregex:jar:1.2_01 2010-02-08T17:11:25+0000][org.apache.lucene:lucene-core:jar:2.4.0 2010-02-08T17:11:27+0000][org.apache.lucene:lucene-snowball:jar:2.4.0 2010-02-08T17:11:28+0000][opennlp:maxent:jar:2.5.1 2010-02-08T17:11:28+0000][postgresql:postgresql:jar:8.3-603.jdbc3 2010-02-08T17:11:31+0000][trove:trove:jar:1.0.2 2010-02-08T17:11:32+0000][opsin:core:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][opsin:inchi:jar:1.0-SNAPSHOT 2010-07-08T08:05:58+0100][net.sf.jni-inchi:jni-inchi:jar:0.5 2010-04-22T11:11:23+0100][taglibs:regexp:jar:1.0.1 2010-04-21T14:26:39+0100][org.apache.poi:poi:jar:3.2-FINAL 2010-02-12T11:32:20+0000][openNLP:openNLP:jar:1.4.1 2010-02-12T11:32:18+0000][wwmm-expediency:maxent:jar:2.4.0 2010-02-12T11:32:21+0000][org.apache.poi:poi-scratchpad:jar:3.5-beta5 2010-04-21T14:26:39+0100][cml:chemical-treebank:jar:1.0-SNAPSHOT 2010-07-08T08:05:59+0100][com.google.collections:google-collections:jar:1.0 2010-04-22T11:53:33+0100][org.ccil.cowan.tagsoup:tagsoup:jar:1.0.1 2010-05-04T15:45:08+0100][net.sf:Classifier4J:jar:0.6 2010-06-09T13:12:47+0100][cml:opencloud:jar:1.0-SNAPSHOT 2010-07-01T12:14:46+0100]))
+(source reaction([aldehydes/step0/reaction.cml 2010-07-08T15:01:08+0100][aldehydes/step1/reaction.cml 2010-07-08T15:01:08+0100][aldehydes/step2/reaction.cml 2010-07-08T15:01:08+0100][aldehydes/step3/reaction.cml 2010-07-08T15:01:08+0100][co2/step0/reaction.cml 2010-07-08T15:01:08+0100][co2/step1/reaction.cml 2010-07-08T15:01:08+0100][co2/step2/reaction.cml 2010-07-08T15:01:08+0100][co2/step3/reaction.cml 2010-07-08T15:01:08+0100][ketones/step0/reaction.cml 2010-07-08T15:01:08+0100][ketones/step1/reaction.cml 2010-07-08T15:01:08+0100][ketones/step2/reaction.cml 2010-07-08T15:01:09+0100][ketones/step3/reaction.cml 2010-07-08T15:01:08+0100]))
+(op electron(in aldehydes/step0/reaction.cml)(out [aldehydes/step0/reaction.electron.cml 2010-07-08T15:06:21+0100 ** aldehydes/step0/]))
+(op electron(in aldehydes/step1/reaction.cml)(out [aldehydes/step1/reaction.electron.cml 2010-07-08T15:06:21+0100 ** aldehydes/step1/]))
+(op electron(in aldehydes/step2/reaction.cml)(out [aldehydes/step2/reaction.electron.cml 2010-07-08T15:06:21+0100 ** aldehydes/step2/]))
+(op electron(in aldehydes/step3/reaction.cml)(out [aldehydes/step3/reaction.electron.cml 2010-07-08T15:06:21+0100 ** aldehydes/step3/]))
+(op electron(in co2/step0/reaction.cml)(out [co2/step0/reaction.electron.cml 2010-07-08T15:06:21+0100 ** co2/step0/]))
+(op electron(in co2/step1/reaction.cml)(out [co2/step1/reaction.electron.cml 2010-07-08T15:06:21+0100 ** co2/step1/]))
+(op electron(in co2/step2/reaction.cml)(out [co2/step2/reaction.electron.cml 2010-07-08T15:06:21+0100 ** co2/step2/]))
+(op electron(in co2/step3/reaction.cml)(out [co2/step3/reaction.electron.cml 2010-07-08T15:06:21+0100 ** co2/step3/]))
+(op electron(in ketones/step0/reaction.cml)(out [ketones/step0/reaction.electron.cml 2010-07-08T15:06:21+0100 ** ketones/step0/]))
+(op electron(in ketones/step1/reaction.cml)(out [ketones/step1/reaction.electron.cml 2010-07-08T15:06:21+0100 ** ketones/step1/]))
+(op electron(in ketones/step2/reaction.cml)(out [ketones/step2/reaction.electron.cml 2010-07-08T15:06:21+0100 ** ketones/step2/]))
+(op electron(in ketones/step3/reaction.cml)(out [ketones/step3/reaction.electron.cml 2010-07-08T15:06:21+0100 ** ketones/step3/]))
+(op map(in aldehydes/step0/reaction.electron.cml)(out [aldehydes/step0/reaction.map.cml 2010-07-08T15:06:23+0100 ** aldehydes/step0/]))
+(op map(in aldehydes/step1/reaction.electron.cml)(out [aldehydes/step1/reaction.map.cml 2010-07-08T15:06:24+0100 ** aldehydes/step1/]))
+(op map(in aldehydes/step2/reaction.electron.cml)(out [aldehydes/step2/reaction.map.cml 2010-07-08T15:06:24+0100 ** aldehydes/step2/]))
+(op map(in aldehydes/step3/reaction.electron.cml)(out [aldehydes/step3/reaction.map.cml 2010-07-08T15:06:24+0100 ** aldehydes/step3/]))
+(op map(in co2/step0/reaction.electron.cml)(out [co2/step0/reaction.map.cml 2010-07-08T15:06:24+0100 ** co2/step0/]))
+(op map(in co2/step1/reaction.electron.cml)(out [co2/step1/reaction.map.cml 2010-07-08T15:06:24+0100 ** co2/step1/]))
+(op map(in co2/step2/reaction.electron.cml)(out [co2/step2/reaction.map.cml 2010-07-08T15:06:24+0100 ** co2/step2/]))
+(op map(in co2/step3/reaction.electron.cml)(out [co2/step3/reaction.map.cml 2010-07-08T15:06:24+0100 ** co2/step3/]))
+(op map(in ketones/step0/reaction.electron.cml)(out [ketones/step0/reaction.map.cml 2010-07-08T15:06:24+0100 ** ketones/step0/]))
+(op map(in ketones/step1/reaction.electron.cml)(out [ketones/step1/reaction.map.cml 2010-07-08T15:06:24+0100 ** ketones/step1/]))
+(op map(in ketones/step2/reaction.electron.cml)(out [ketones/step2/reaction.map.cml 2010-07-08T15:06:24+0100 ** ketones/step2/]))
+(op map(in ketones/step3/reaction.electron.cml)(out [ketones/step3/reaction.map.cml 2010-07-08T15:06:24+0100 ** ketones/step3/]))
+(op cmllite(in aldehydes/step0/reaction.map.cml)(out [aldehydes/step0/reaction.cmllite.cml 2010-07-08T15:06:26+0100 ** aldehydes/step0/]))
+(op cmllite(in aldehydes/step1/reaction.map.cml)(out [aldehydes/step1/reaction.cmllite.cml 2010-07-08T15:06:26+0100 ** aldehydes/step1/]))
+(op cmllite(in aldehydes/step2/reaction.map.cml)(out [aldehydes/step2/reaction.cmllite.cml 2010-07-08T15:06:26+0100 ** aldehydes/step2/]))
+(op cmllite(in aldehydes/step3/reaction.map.cml)(out [aldehydes/step3/reaction.cmllite.cml 2010-07-08T15:06:26+0100 ** aldehydes/step3/]))
+(op cmllite(in co2/step0/reaction.map.cml)(out [co2/step0/reaction.cmllite.cml 2010-07-08T15:06:26+0100 ** co2/step0/]))
+(op cmllite(in co2/step1/reaction.map.cml)(out [co2/step1/reaction.cmllite.cml 2010-07-08T15:06:26+0100 ** co2/step1/]))
+(op cmllite(in co2/step2/reaction.map.cml)(out [co2/step2/reaction.cmllite.cml 2010-07-08T15:06:26+0100 ** co2/step2/]))
+(op cmllite(in co2/step3/reaction.map.cml)(out [co2/step3/reaction.cmllite.cml 2010-07-08T15:06:26+0100 ** co2/step3/]))
+(op cmllite(in ketones/step0/reaction.map.cml)(out [ketones/step0/reaction.cmllite.cml 2010-07-08T15:06:26+0100 ** ketones/step0/]))
+(op cmllite(in ketones/step1/reaction.map.cml)(out [ketones/step1/reaction.cmllite.cml 2010-07-08T15:06:26+0100 ** ketones/step1/]))
+(op cmllite(in ketones/step2/reaction.map.cml)(out [ketones/step2/reaction.cmllite.cml 2010-07-08T15:06:27+0100 ** ketones/step2/]))
+(op cmllite(in ketones/step3/reaction.map.cml)(out [ketones/step3/reaction.cmllite.cml 2010-07-08T15:06:27+0100 ** ketones/step3/]))
+(build-finished 2010-07-08T15:06:27+0100)
Add a comment to this file

orgtest1/aldehydes/intermediate0.cdx

Binary file added.

orgtest1/aldehydes/intermediate0.cleaned.cml

+<?xml version="1.0" encoding="UTF-8"?>
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orgtest1/aldehydes/intermediate0.raw.cml

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Add a comment to this file

orgtest1/aldehydes/intermediate1.cdx

Binary file added.

orgtest1/aldehydes/intermediate1.cleaned.cml

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orgtest1/aldehydes/intermediate1.raw.cml

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cdx:Z="48" cdx:B="46" cdx:E="72" cdx:BS="N"/><bond atomRefs2="a52 a4" id="a52_a4" order="1" cdx:Z="54" cdx:B="52" cdx:E="4" cdx:BS="N"/></bondArray></molecule><molecule cdx:BoundingBox="175.0721 155.9036 225.5851 173.5953" id="x82"><atomArray><atom id="a64" formalCharge="1" elementType="Mg" hydrogenCount="0" cdx:p="190.2252 161.5369" cdx:Z="39" cdx:Element="12" cdx:NumHydrogens="0" cdx:Charge="1" cdx:AS="N" x2="190.2252" y2="-161.5369"><label dictRef="cdx:label" cdx:p="193.2721 165.2369" cdx:BoundingBox="175.0721 155.9036 193.2721 167.3369" cdx:LabelJustification="Right" cdx:Justification="Right" cdx:LineHeight="0" cdx:LabelAlignment="Right" cdx:temp_Text="[[0 3 96 10 3]]Mg+" id="x0" cdx:fontIndex="3" cdx:typeFace="96" cdx:size="10" cdx:color="3" value="Mg+"/></atom><atom id="a74" elementType="Br" hydrogenCount="0" cdx:p="219.0008 170.0203" cdx:Z="49" cdx:Element="35" cdx:NumHydrogens="0" cdx:AS="N" x2="219.0008" y2="-170.0203"/></atomArray><bondArray><bond atomRefs2="a64 a74" id="a64_a74" order="1" cdx:Z="50" cdx:B="64" cdx:E="74" cdx:BS="N"/></bondArray></molecule></moleculeList></cml>
Add a comment to this file

orgtest1/aldehydes/intermediate2.cdx

Binary file added.

orgtest1/aldehydes/intermediate2.cleaned.cml

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orgtest1/aldehydes/intermediate2.raw.cml

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cdx:NumHydrogens="0" cdx:AS="N" x2="252.4209" y2="-184.5513"/><atom id="a87" elementType="H" hydrogenCount="0" cdx:p="238.9723 234.7423" cdx:Z="62" cdx:Element="1" cdx:NumHydrogens="0" cdx:AS="N" x2="238.9723" y2="-234.7423"/></atomArray><bondArray><bond atomRefs2="a81 a83" id="a81_a83" order="1" cdx:Z="59" cdx:B="81" cdx:E="83" cdx:BS="N"/><bond atomRefs2="a83 a85" id="a83_a85" order="1" cdx:Z="61" cdx:B="83" cdx:E="85" cdx:BS="N"/><bond atomRefs2="a83 a87" id="a83_a87" order="1" cdx:Z="63" cdx:B="83" cdx:E="87" cdx:BS="N"/></bondArray></molecule></moleculeList></cml>
Add a comment to this file

orgtest1/aldehydes/intermediate3.cdx

Binary file added.

orgtest1/aldehydes/intermediate3.cleaned.cml

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orgtest1/aldehydes/intermediate3.raw.cml

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orgtest1/aldehydes/step0/product.cml

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orgtest1/aldehydes/step0/reactant.cml

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orgtest1/aldehydes/step0/reaction.cml

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id="a4_a8" order="2"/><bond atomRefs2="a2 a10" id="a2_a10" order="1"/><bond atomRefs2="a2 a12" id="a2_a12" order="1"/><bond atomRefs2="a2 a18" id="a2_a18" order="1"/></bondArray></molecule></reactant><reactant><molecule id="mol2"><atomArray><atom id="a44" elementType="C" hydrogenCount="1" x2="90.1332" y2="-125.9081"/><atom id="a46" elementType="C" hydrogenCount="1" x2="68.3986" y2="-146.5867"/><atom id="a48" elementType="C" hydrogenCount="1" x2="75.4395" y2="-175.7488"/><atom id="a50" elementType="C" hydrogenCount="1" x2="104.2151" y2="-184.2322"/><atom id="a52" elementType="C" hydrogenCount="0" x2="125.9497" y2="-163.5535"/><atom id="a54" elementType="C" hydrogenCount="1" x2="118.9088" y2="-134.3915"/><atom id="a62" elementType="H" hydrogenCount="0" x2="109.49582223079112" y2="-206.10374116820765"/><atom id="a64" elementType="Mg" hydrogenCount="0" x2="154.7252" y2="-172.0369"/><atom id="a66" elementType="H" hydrogenCount="0" x2="59.138528785726066" y2="-191.25778700182528"/><atom 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orgtest1/aldehydes/step0/reaction.cmllite.cml

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orgtest1/aldehydes/step0/reaction.electron.cml

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id="a48_a66" order="1" cmlx:electrons="2"/><bond atomRefs2="a54 a68" id="a54_a68" order="1" cmlx:electrons="2"/><bond atomRefs2="a44 a70" id="a44_a70" order="1" cmlx:electrons="2"/><bond atomRefs2="a46 a72" id="a46_a72" order="1" cmlx:electrons="2"/><bond atomRefs2="a52 a4" id="a52_a4" order="1" cmlx:electrons="2"/></bondArray></molecule></product><product><molecule id="mol4"><atomArray><atom id="a64" formalCharge="1" elementType="Mg" hydrogenCount="0" x2="190.2252" y2="-161.5369" cmlx:loneElectrons="-1"><label dictRef="cdx:label" id="x0" value="Mg+"/></atom><atom id="a74" elementType="Br" hydrogenCount="0" x2="219.0008" y2="-170.0203" cmlx:loneElectrons="-3"/></atomArray><bondArray><bond atomRefs2="a64 a74" id="a64_a74" order="1" cmlx:electrons="2"/></bondArray></molecule></product></productList></reaction>

orgtest1/aldehydes/step0/reaction.map.cml

+<?xml version="1.0" encoding="UTF-8"?>
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cmlx:loneElectrons="0"/><atom id="a44" elementType="C" hydrogenCount="1" x2="90.1332" y2="-125.9081" cmlx:loneElectrons="0"/><atom id="a46" elementType="C" hydrogenCount="1" x2="68.3986" y2="-146.5867" cmlx:loneElectrons="0"/><atom id="a48" elementType="C" hydrogenCount="1" x2="75.4395" y2="-175.7488" cmlx:loneElectrons="0"/><atom id="a50" elementType="C" hydrogenCount="1" x2="104.2151" y2="-184.2322" cmlx:loneElectrons="0"/><atom id="a52" elementType="C" hydrogenCount="0" x2="125.9497" y2="-163.5535" cmlx:loneElectrons="0"/><atom id="a54" elementType="C" hydrogenCount="1" x2="118.9088" y2="-134.3915" cmlx:loneElectrons="0"/><atom id="a62" elementType="H" hydrogenCount="0" x2="109.49582223079112" y2="-206.10374116820765" cmlx:loneElectrons="0"/><atom id="a64" elementType="Mg" hydrogenCount="0" x2="154.7252" y2="-172.0369" cmlx:loneElectrons="-1"/><atom id="a66" elementType="H" hydrogenCount="0" x2="59.138528785726066" y2="-191.25778700182528" cmlx:loneElectrons="0"/><atom id="a68" elementType="H" hydrogenCount="0" x2="135.20976514775626" y2="-118.88250662186586" cmlx:loneElectrons="0"/><atom id="a70" elementType="H" hydrogenCount="0" x2="84.85250417863018" y2="-104.03655245544932" cmlx:loneElectrons="0"/><atom id="a72" elementType="H" hydrogenCount="0" x2="46.816942474566076" y2="-140.2241219999866" cmlx:loneElectrons="0"/><atom id="a74" elementType="Br" hydrogenCount="0" x2="183.5008" y2="-180.5203" cmlx:loneElectrons="-3"/></atomArray><bondArray><bond atomRefs2="a2 a4" id="a2_a4" order="1" cmlx:electrons="2"/><bond atomRefs2="a4 a6" id="a4_a6" order="1" cmlx:electrons="2"/><bond atomRefs2="a4 a8" id="a4_a8" order="2" cmlx:electrons="4"/><bond atomRefs2="a2 a10" id="a2_a10" order="1" cmlx:electrons="2"/><bond atomRefs2="a2 a12" id="a2_a12" order="1" cmlx:electrons="2"/><bond atomRefs2="a2 a18" id="a2_a18" order="1" cmlx:electrons="2"/><bond atomRefs2="a44 a46" id="a44_a46" order="2" cmlx:electrons="4"/><bond atomRefs2="a46 a48" id="a46_a48" order="1" cmlx:electrons="2"/><bond atomRefs2="a48 a50" id="a48_a50" order="2" cmlx:electrons="4"/><bond atomRefs2="a50 a52" id="a50_a52" order="1" cmlx:electrons="2"/><bond atomRefs2="a52 a54" id="a52_a54" order="2" cmlx:electrons="4"/><bond atomRefs2="a54 a44" id="a54_a44" order="1" cmlx:electrons="2"/><bond atomRefs2="a50 a62" id="a50_a62" order="1" cmlx:electrons="2"/><bond atomRefs2="a52 a64" id="a52_a64" order="1" cmlx:electrons="2"/><bond atomRefs2="a48 a66" id="a48_a66" order="1" cmlx:electrons="2"/><bond atomRefs2="a54 a68" id="a54_a68" order="1" cmlx:electrons="2"/><bond atomRefs2="a44 a70" id="a44_a70" order="1" cmlx:electrons="2"/><bond atomRefs2="a46 a72" id="a46_a72" order="1" cmlx:electrons="2"/><bond atomRefs2="a64 a74" id="a64_a74" order="1" cmlx:electrons="2"/><bond atomRefs2="a52 a4" id="a52_a4" order="." cmlx:electrons="0"/></bondArray></molecule></reactant></reactantList><productList><product><molecule id="p_mol"><atomArray><atom id="a2" elementType="C" hydrogenCount="3" 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order="1" cmlx:electrons="2"/><bond atomRefs2="a52 a54" id="a52_a54" order="2" cmlx:electrons="4"/><bond atomRefs2="a54 a44" id="a54_a44" order="1" cmlx:electrons="2"/><bond atomRefs2="a50 a62" id="a50_a62" order="1" cmlx:electrons="2"/><bond atomRefs2="a48 a66" id="a48_a66" order="1" cmlx:electrons="2"/><bond atomRefs2="a54 a68" id="a54_a68" order="1" cmlx:electrons="2"/><bond atomRefs2="a44 a70" id="a44_a70" order="1" cmlx:electrons="2"/><bond atomRefs2="a46 a72" id="a46_a72" order="1" cmlx:electrons="2"/><bond atomRefs2="a52 a4" id="a52_a4" order="1" cmlx:electrons="2"/><bond atomRefs2="a64 a74" id="a64_a74" order="1" cmlx:electrons="2"/><bond atomRefs2="a52 a64" id="a52_a64" order="." cmlx:electrons="0"/></bondArray></molecule></product></productList></reaction>

orgtest1/aldehydes/step1/product.cml

+<?xml version="1.0" encoding="UTF-8"?>
+<cml xmlns="http://www.xml-cml.org/schema" xmlns:cdx="http://www.xml-cml/namespaces/cdx"><moleculeList><molecule id="x90"><atomArray><atom id="a2" elementType="C" hydrogenCount="3" x2="122.3549" y2="-231.75"/><atom id="a4" elementType="C" hydrogenCount="1" x2="148.3357" y2="-216.75"/><atom id="a6" elementType="H" hydrogenCount="0" x2="162.37458936199812" y2="-232.36763586831168"/><atom id="a8" formalCharge="-1" elementType="O" hydrogenCount="0" x2="169.5489" y2="-195.5367"><label dictRef="cdx:label" id="x0" value="O-"/></atom><atom id="a10" elementType="H" hydrogenCount="0" x2="101.70049831329608" y2="-243.67480698440997"/><atom id="a12" elementType="H" hydrogenCount="0" x2="134.27970698440998" y2="-252.40440168670392"/><atom id="a18" elementType="H" hydrogenCount="0" x2="110.43009301559002" y2="-211.09559831329608"/><atom id="a44" elementType="C" hydrogenCount="1" x2="102.0934" y2="-133.0276"/><atom id="a46" elementType="C" hydrogenCount="1" x2="73.3551" y2="-141.636"/><atom id="a48" elementType="C" hydrogenCount="1" x2="66.4409" y2="-170.8284"/><atom id="a50" elementType="C" hydrogenCount="1" x2="88.2652" y2="-191.4124"/><atom id="a52" elementType="C" hydrogenCount="0" x2="117.0036" y2="-182.804"/><atom id="a54" elementType="C" hydrogenCount="1" x2="123.9177" y2="-153.6116"/><atom id="a62" elementType="H" hydrogenCount="0" x2="82.76856598912133" y2="-214.6199924042457"/><atom id="a66" elementType="H" hydrogenCount="0" x2="43.59420848873038" y2="-177.6719383859544"/><atom id="a68" elementType="H" hydrogenCount="0" x2="146.76438041240982" y2="-146.7680245613598"/><atom id="a70" elementType="H" hydrogenCount="0" x2="107.59002291194274" y2="-109.82000496701443"/><atom id="a72" elementType="H" hydrogenCount="0" x2="56.00506653572509" y2="-125.27196414573434"/></atomArray><bondArray><bond atomRefs2="a2 a4" id="a2_a4" order="1"/><bond atomRefs2="a4 a6" id="a4_a6" order="1"/><bond atomRefs2="a4 a8" id="a4_a8" order="1"/><bond atomRefs2="a2 a10" id="a2_a10" order="1"/><bond atomRefs2="a2 a12" id="a2_a12" order="1"/><bond atomRefs2="a2 a18" id="a2_a18" order="1"/><bond atomRefs2="a44 a46" id="a44_a46" order="2"/><bond atomRefs2="a46 a48" id="a46_a48" order="1"/><bond atomRefs2="a48 a50" id="a48_a50" order="2"/><bond atomRefs2="a50 a52" id="a50_a52" order="1"/><bond atomRefs2="a52 a54" id="a52_a54" order="2"/><bond atomRefs2="a54 a44" id="a54_a44" order="1"/><bond atomRefs2="a50 a62" id="a50_a62" order="1"/><bond atomRefs2="a48 a66" id="a48_a66" order="1"/><bond atomRefs2="a54 a68" id="a54_a68" order="1"/><bond atomRefs2="a44 a70" id="a44_a70" order="1"/><bond atomRefs2="a46 a72" id="a46_a72" order="1"/><bond atomRefs2="a52 a4" id="a52_a4" order="1"/></bondArray></molecule><molecule id="x90"><atomArray><atom id="a81" elementType="H" hydrogenCount="0" x2="202.2299" y2="-198.0"/><atom id="a83" formalCharge="1" elementType="O" hydrogenCount="0" x2="231.2077" y2="-205.7645"><label dictRef="cdx:label" id="x0" value="O+"/></atom><atom id="a85" elementType="H" hydrogenCount="0" x2="252.4209" y2="-184.5513"/><atom id="a87" elementType="H" hydrogenCount="0" x2="238.9723" y2="-234.7423"/></atomArray><bondArray><bond atomRefs2="a81 a83" id="a81_a83" order="1"/><bond atomRefs2="a83 a85" id="a83_a85" order="1"/><bond atomRefs2="a83 a87" id="a83_a87" order="1"/></bondArray></molecule></moleculeList></cml>

orgtest1/aldehydes/step1/reactant.cml

+<?xml version="1.0" encoding="UTF-8"?>
+<cml xmlns="http://www.xml-cml.org/schema" xmlns:cdx="http://www.xml-cml/namespaces/cdx"><moleculeList><molecule id="x82"><atomArray><atom id="a2" elementType="C" hydrogenCount="3" x2="122.3549" y2="-231.75"/><atom id="a4" elementType="C" hydrogenCount="1" x2="148.3357" y2="-216.75"/><atom id="a6" elementType="H" hydrogenCount="0" x2="162.37458936199812" y2="-232.36763586831168"/><atom id="a8" formalCharge="-1" elementType="O" hydrogenCount="0" x2="169.5489" y2="-195.5367"><label dictRef="cdx:label" id="x0" value="O-"/></atom><atom id="a10" elementType="H" hydrogenCount="0" x2="101.70049831329608" y2="-243.67480698440997"/><atom id="a12" elementType="H" hydrogenCount="0" x2="134.27970698440998" y2="-252.40440168670392"/><atom id="a18" elementType="H" hydrogenCount="0" x2="110.43009301559002" y2="-211.09559831329608"/><atom id="a44" elementType="C" hydrogenCount="1" x2="102.0934" y2="-133.0276"/><atom id="a46" elementType="C" hydrogenCount="1" x2="73.3551" y2="-141.636"/><atom id="a48" elementType="C" hydrogenCount="1" x2="66.4409" y2="-170.8284"/><atom id="a50" elementType="C" hydrogenCount="1" x2="88.2652" y2="-191.4124"/><atom id="a52" elementType="C" hydrogenCount="0" x2="117.0036" y2="-182.804"/><atom id="a54" elementType="C" hydrogenCount="1" x2="123.9177" y2="-153.6116"/><atom id="a62" elementType="H" hydrogenCount="0" x2="82.76856598912133" y2="-214.6199924042457"/><atom id="a66" elementType="H" hydrogenCount="0" x2="43.59420848873038" y2="-177.6719383859544"/><atom id="a68" elementType="H" hydrogenCount="0" x2="146.76438041240982" y2="-146.7680245613598"/><atom id="a70" elementType="H" hydrogenCount="0" x2="107.59002291194274" y2="-109.82000496701443"/><atom id="a72" elementType="H" hydrogenCount="0" x2="56.00506653572509" y2="-125.27196414573434"/></atomArray><bondArray><bond atomRefs2="a2 a4" id="a2_a4" order="1"/><bond atomRefs2="a4 a6" id="a4_a6" order="1"/><bond atomRefs2="a4 a8" id="a4_a8" order="1"/><bond atomRefs2="a2 a10" id="a2_a10" order="1"/><bond atomRefs2="a2 a12" id="a2_a12" order="1"/><bond atomRefs2="a2 a18" id="a2_a18" order="1"/><bond atomRefs2="a44 a46" id="a44_a46" order="2"/><bond atomRefs2="a46 a48" id="a46_a48" order="1"/><bond atomRefs2="a48 a50" id="a48_a50" order="2"/><bond atomRefs2="a50 a52" id="a50_a52" order="1"/><bond atomRefs2="a52 a54" id="a52_a54" order="2"/><bond atomRefs2="a54 a44" id="a54_a44" order="1"/><bond atomRefs2="a50 a62" id="a50_a62" order="1"/><bond atomRefs2="a48 a66" id="a48_a66" order="1"/><bond atomRefs2="a54 a68" id="a54_a68" order="1"/><bond atomRefs2="a44 a70" id="a44_a70" order="1"/><bond atomRefs2="a46 a72" id="a46_a72" order="1"/><bond atomRefs2="a52 a4" id="a52_a4" order="1"/></bondArray></molecule><molecule id="x82"><atomArray><atom id="a64" formalCharge="1" elementType="Mg" hydrogenCount="0" x2="190.2252" y2="-161.5369"><label dictRef="cdx:label" id="x0" value="Mg+"/></atom><atom id="a74" elementType="Br" hydrogenCount="0" x2="219.0008" y2="-170.0203"/></atomArray><bondArray><bond atomRefs2="a64 a74" id="a64_a74" order="1"/></bondArray></molecule></moleculeList></cml>

orgtest1/aldehydes/step1/reaction.cml

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orgtest1/aldehydes/step1/reaction.cmllite.cml

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orgtest1/aldehydes/step1/reaction.electron.cml

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cmlx:electrons="2"/></bondArray></molecule></reactant></reactantList><productList><product><molecule id="mol3"><atomArray><atom id="a2" elementType="C" hydrogenCount="3" x2="122.3549" y2="-231.75" cmlx:loneElectrons="0"/><atom id="a4" elementType="C" hydrogenCount="1" x2="148.3357" y2="-216.75" cmlx:loneElectrons="0"/><atom id="a6" elementType="H" hydrogenCount="0" x2="162.37458936199812" y2="-232.36763586831168" cmlx:loneElectrons="0"/><atom id="a8" formalCharge="-1" elementType="O" hydrogenCount="0" x2="169.5489" y2="-195.5367" cmlx:loneElectrons="6"><label dictRef="cdx:label" id="x0" value="O-"/></atom><atom id="a10" elementType="H" hydrogenCount="0" x2="101.70049831329608" y2="-243.67480698440997" cmlx:loneElectrons="0"/><atom id="a12" elementType="H" hydrogenCount="0" x2="134.27970698440998" y2="-252.40440168670392" cmlx:loneElectrons="0"/><atom id="a18" elementType="H" hydrogenCount="0" x2="110.43009301559002" y2="-211.09559831329608" cmlx:loneElectrons="0"/><atom id="a44" 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orgtest1/aldehydes/step1/reaction.map.cml

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orgtest1/aldehydes/step2/product.cml

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orgtest1/aldehydes/step2/reactant.cml

+<?xml version="1.0" encoding="UTF-8"?>
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orgtest1/aldehydes/step2/reaction.cml

+<?xml version="1.0" encoding="UTF-8"?>
+<reaction cmlx:fileId="C:\Users\pm286\workspace\curly\orgtest1\aldehydes\step2\reaction.cml" xmlns="http://www.xml-cml.org/schema" xmlns:cmlx="http://www.xml-cml.org/schema/cmlx"><reactantList><reactant><molecule id="mol1"><atomArray><atom id="a2" elementType="C" hydrogenCount="3" x2="122.3549" y2="-231.75"/><atom id="a4" elementType="C" hydrogenCount="1" x2="148.3357" y2="-216.75"/><atom id="a6" elementType="H" hydrogenCount="0" x2="162.37458936199812" y2="-232.36763586831168"/><atom id="a8" formalCharge="-1" elementType="O" hydrogenCount="0" x2="169.5489" y2="-195.5367"><label dictRef="cdx:label" id="x0" value="O-"/></atom><atom id="a10" elementType="H" hydrogenCount="0" x2="101.70049831329608" y2="-243.67480698440997"/><atom id="a12" elementType="H" hydrogenCount="0" x2="134.27970698440998" y2="-252.40440168670392"/><atom id="a18" elementType="H" hydrogenCount="0" x2="110.43009301559002" y2="-211.09559831329608"/><atom id="a44" elementType="C" hydrogenCount="1" x2="102.0934" 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orgtest1/aldehydes/step2/reaction.cmllite.cml

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orgtest1/aldehydes/step2/reaction.electron.cml

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orgtest1/aldehydes/step2/reaction.map.cml

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hydrogenCount="0" x2="146.76438041240982" y2="-146.7680245613598" cmlx:loneElectrons="0"/><atom id="a70" elementType="H" hydrogenCount="0" x2="107.59002291194274" y2="-109.82000496701443" cmlx:loneElectrons="0"/><atom id="a72" elementType="H" hydrogenCount="0" x2="56.00506653572509" y2="-125.27196414573434" cmlx:loneElectrons="0"/><atom id="a81" elementType="H" hydrogenCount="0" x2="202.2299" y2="-198.0" cmlx:loneElectrons="0"/><atom id="a83" formalCharge="1" elementType="O" hydrogenCount="0" x2="231.2077" y2="-205.7645" cmlx:loneElectrons="2"><label dictRef="cdx:label" id="x0" value="O+"/></atom><atom id="a85" elementType="H" hydrogenCount="0" x2="252.4209" y2="-184.5513" cmlx:loneElectrons="0"/><atom id="a87" elementType="H" hydrogenCount="0" x2="238.9723" y2="-234.7423" cmlx:loneElectrons="0"/></atomArray><bondArray><bond atomRefs2="a2 a4" id="a2_a4" order="1" cmlx:electrons="2"/><bond atomRefs2="a4 a6" id="a4_a6" order="1" cmlx:electrons="2"/><bond atomRefs2="a4 a8" id="a4_a8" order="1" cmlx:electrons="2"/><bond atomRefs2="a2 a10" id="a2_a10" order="1" cmlx:electrons="2"/><bond atomRefs2="a2 a12" id="a2_a12" order="1" cmlx:electrons="2"/><bond atomRefs2="a2 a18" id="a2_a18" order="1" cmlx:electrons="2"/><bond atomRefs2="a44 a46" id="a44_a46" order="2" cmlx:electrons="4"/><bond atomRefs2="a46 a48" id="a46_a48" order="1" cmlx:electrons="2"/><bond atomRefs2="a48 a50" id="a48_a50" order="2" cmlx:electrons="4"/><bond atomRefs2="a50 a52" id="a50_a52" order="1" cmlx:electrons="2"/><bond atomRefs2="a52 a54" id="a52_a54" order="2" cmlx:electrons="4"/><bond atomRefs2="a54 a44" id="a54_a44" order="1" cmlx:electrons="2"/><bond atomRefs2="a50 a62" id="a50_a62" order="1" cmlx:electrons="2"/><bond atomRefs2="a48 a66" id="a48_a66" order="1" cmlx:electrons="2"/><bond atomRefs2="a54 a68" id="a54_a68" order="1" cmlx:electrons="2"/><bond atomRefs2="a44 a70" id="a44_a70" order="1" cmlx:electrons="2"/><bond atomRefs2="a46 a72" id="a46_a72" order="1" cmlx:electrons="2"/><bond atomRefs2="a52 a4" id="a52_a4" order="1" cmlx:electrons="2"/><bond atomRefs2="a81 a83" id="a81_a83" order="1" cmlx:electrons="2"/><bond atomRefs2="a83 a85" id="a83_a85" order="1" cmlx:electrons="2"/><bond atomRefs2="a83 a87" id="a83_a87" order="1" cmlx:electrons="2"/><bond atomRefs2="a8 a81" id="a8_a81" order="." cmlx:electrons="0"/></bondArray></molecule></reactant></reactantList><productList><product><molecule id="p_mol"><atomArray><atom id="a2" elementType="C" hydrogenCount="3" x2="122.3549" y2="-231.75" cmlx:loneElectrons="0"/><atom id="a4" elementType="C" hydrogenCount="1" x2="148.3357" y2="-216.75" cmlx:loneElectrons="0"/><atom id="a6" elementType="H" hydrogenCount="0" x2="162.37458936199812" y2="-232.36763586831168" cmlx:loneElectrons="0"/><atom id="a8" elementType="O" hydrogenCount="0" x2="169.5489" y2="-195.5367" cmlx:loneElectrons="4"/><atom id="a10" elementType="H" hydrogenCount="0" x2="101.70049831329608" y2="-243.67480698440997" cmlx:loneElectrons="0"/><atom id="a12" elementType="H" hydrogenCount="0" x2="134.27970698440998" y2="-252.40440168670392" cmlx:loneElectrons="0"/><atom id="a18" elementType="H" hydrogenCount="0" x2="110.43009301559002" y2="-211.09559831329608" cmlx:loneElectrons="0"/><atom id="a44" elementType="C" hydrogenCount="1" x2="102.0934" y2="-133.0276" cmlx:loneElectrons="0"/><atom id="a46" elementType="C" hydrogenCount="1" x2="73.3551" y2="-141.636" cmlx:loneElectrons="0"/><atom id="a48" elementType="C" hydrogenCount="1" x2="66.4409" y2="-170.8284" cmlx:loneElectrons="0"/><atom id="a50" elementType="C" hydrogenCount="1" x2="88.2652" y2="-191.4124" cmlx:loneElectrons="0"/><atom id="a52" elementType="C" hydrogenCount="0" x2="117.0036" y2="-182.804" cmlx:loneElectrons="0"/><atom id="a54" elementType="C" hydrogenCount="1" x2="123.9177" y2="-153.6116" cmlx:loneElectrons="0"/><atom id="a62" elementType="H" hydrogenCount="0" x2="82.76856598912133" y2="-214.6199924042457" cmlx:loneElectrons="0"/><atom id="a66" elementType="H" hydrogenCount="0" x2="43.59420848873038" y2="-177.6719383859544" cmlx:loneElectrons="0"/><atom id="a68" elementType="H" hydrogenCount="0" x2="146.76438041240982" y2="-146.7680245613598" cmlx:loneElectrons="0"/><atom id="a70" elementType="H" hydrogenCount="0" x2="107.59002291194274" y2="-109.82000496701443" cmlx:loneElectrons="0"/><atom id="a72" elementType="H" hydrogenCount="0" x2="56.00506653572509" y2="-125.27196414573434" cmlx:loneElectrons="0"/><atom id="a81" elementType="H" hydrogenCount="0" x2="186.41310246087838" y2="-178.67241804049593" cmlx:loneElectrons="0"/><atom id="a83" elementType="O" hydrogenCount="0" x2="231.2077" y2="-205.7645" cmlx:loneElectrons="4"/><atom id="a85" elementType="H" hydrogenCount="0" x2="252.4209" y2="-184.5513" cmlx:loneElectrons="0"/><atom id="a87" elementType="H" hydrogenCount="0" x2="238.9723" y2="-234.7423" cmlx:loneElectrons="0"/></atomArray><bondArray><bond atomRefs2="a2 a4" id="a2_a4" order="1" cmlx:electrons="2"/><bond atomRefs2="a4 a6" id="a4_a6" order="1" cmlx:electrons="2"/><bond atomRefs2="a4 a8" id="a4_a8" order="1" cmlx:electrons="2"/><bond atomRefs2="a2 a10" id="a2_a10" order="1" cmlx:electrons="2"/><bond atomRefs2="a2 a12" id="a2_a12" order="1" cmlx:electrons="2"/><bond atomRefs2="a2 a18" id="a2_a18" order="1" cmlx:electrons="2"/><bond atomRefs2="a44 a46" id="a44_a46" order="2" cmlx:electrons="4"/><bond atomRefs2="a46 a48" id="a46_a48" order="1" cmlx:electrons="2"/><bond atomRefs2="a48 a50" id="a48_a50" order="2" cmlx:electrons="4"/><bond atomRefs2="a50 a52" id="a50_a52" order="1" cmlx:electrons="2"/><bond atomRefs2="a52 a54" id="a52_a54" order="2" cmlx:electrons="4"/><bond atomRefs2="a54 a44" id="a54_a44" order="1" cmlx:electrons="2"/><bond atomRefs2="a50 a62" id="a50_a62" order="1" cmlx:electrons="2"/><bond atomRefs2="a48 a66" id="a48_a66" order="1" cmlx:electrons="2"/><bond atomRefs2="a54 a68" id="a54_a68" order="1" cmlx:electrons="2"/><bond atomRefs2="a44 a70" id="a44_a70" order="1" cmlx:electrons="2"/><bond atomRefs2="a46 a72" id="a46_a72" order="1" cmlx:electrons="2"/><bond atomRefs2="a52 a4" id="a52_a4" order="1" cmlx:electrons="2"/><bond atomRefs2="a8 a81" id="a8_a81" order="1" cmlx:electrons="2"/><bond atomRefs2="a83 a85" id="a83_a85" order="1" cmlx:electrons="2"/><bond atomRefs2="a83 a87" id="a83_a87" order="1" cmlx:electrons="2"/><bond atomRefs2="a81 a83" id="a81_a83" order="." cmlx:electrons="0"/></bondArray></molecule></product></productList></reaction>

orgtest1/aldehydes/step3/reactant.cml

+<?xml version="1.0" encoding="UTF-8"?>
+<cml xmlns="http://www.xml-cml.org/schema" xmlns:cdx="http://www.xml-cml/namespaces/cdx"><moleculeList><molecule id="x95"><atomArray><atom id="a2" elementType="C" hydrogenCount="3" x2="122.3549" y2="-231.75"/><atom id="a4" elementType="C" hydrogenCount="1" x2="148.3357" y2="-216.75"/><atom id="a6" elementType="H" hydrogenCount="0" x2="162.37458936199812" y2="-232.36763586831168"/><atom id="a8" elementType="O" hydrogenCount="0" x2="169.5489" y2="-195.5367"/><atom id="a10" elementType="H" hydrogenCount="0" x2="101.70049831329608" y2="-243.67480698440997"/><atom id="a12" elementType="H" hydrogenCount="0" x2="134.27970698440998" y2="-252.40440168670392"/><atom id="a18" elementType="H" hydrogenCount="0" x2="110.43009301559002" y2="-211.09559831329608"/><atom id="a44" elementType="C" hydrogenCount="1" x2="102.0934" y2="-133.0276"/><atom id="a46" elementType="C" hydrogenCount="1" x2="73.3551" y2="-141.636"/><atom id="a48" elementType="C" hydrogenCount="1" x2="66.4409" y2="-170.8284"/><atom id="a50" elementType="C" hydrogenCount="1" x2="88.2652" y2="-191.4124"/><atom id="a52" elementType="C" hydrogenCount="0" x2="117.0036" y2="-182.804"/><atom id="a54" elementType="C" hydrogenCount="1" x2="123.9177" y2="-153.6116"/><atom id="a62" elementType="H" hydrogenCount="0" x2="82.76856598912133" y2="-214.6199924042457"/><atom id="a66" elementType="H" hydrogenCount="0" x2="43.59420848873038" y2="-177.6719383859544"/><atom id="a68" elementType="H" hydrogenCount="0" x2="146.76438041240982" y2="-146.7680245613598"/><atom id="a70" elementType="H" hydrogenCount="0" x2="107.59002291194274" y2="-109.82000496701443"/><atom id="a72" elementType="H" hydrogenCount="0" x2="56.00506653572509" y2="-125.27196414573434"/><atom id="a81" elementType="H" hydrogenCount="0" x2="186.41310246087838" y2="-178.67241804049593"/></atomArray><bondArray><bond atomRefs2="a2 a4" id="a2_a4" order="1"/><bond atomRefs2="a4 a6" id="a4_a6" order="1"/><bond atomRefs2="a4 a8" id="a4_a8" order="1"/><bond atomRefs2="a2 a10" id="a2_a10" order="1"/><bond atomRefs2="a2 a12" id="a2_a12" order="1"/><bond atomRefs2="a2 a18" id="a2_a18" order="1"/><bond atomRefs2="a44 a46" id="a44_a46" order="2"/><bond atomRefs2="a46 a48" id="a46_a48" order="1"/><bond atomRefs2="a48 a50" id="a48_a50" order="2"/><bond atomRefs2="a50 a52" id="a50_a52" order="1"/><bond atomRefs2="a52 a54" id="a52_a54" order="2"/><bond atomRefs2="a54 a44" id="a54_a44" order="1"/><bond atomRefs2="a50 a62" id="a50_a62" order="1"/><bond atomRefs2="a48 a66" id="a48_a66" order="1"/><bond atomRefs2="a54 a68" id="a54_a68" order="1"/><bond atomRefs2="a44 a70" id="a44_a70" order="1"/><bond atomRefs2="a46 a72" id="a46_a72" order="1"/><bond atomRefs2="a52 a4" id="a52_a4" order="1"/><bond atomRefs2="a8 a81" id="a8_a81" order="1"/></bondArray></molecule><molecule id="x95"><atomArray><atom id="a83" elementType="O" hydrogenCount="0" x2="231.2077" y2="-205.7645"/><atom id="a85" elementType="H" hydrogenCount="0" x2="252.4209" y2="-184.5513"/><atom id="a87" elementType="H" hydrogenCount="0" x2="238.9723" y2="-234.7423"/></atomArray><bondArray><bond atomRefs2="a83 a85" id="a83_a85" order="1"/><bond atomRefs2="a83 a87" id="a83_a87" order="1"/></bondArray></molecule></moleculeList></cml>
Add a comment to this file

orgtest1/aldehydes/step3/reaction.cml

Empty file added.

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orgtest1/aldehydes/step3/reaction.cmllite.cml

Empty file added.

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orgtest1/aldehydes/step3/reaction.electron.cml

Empty file added.

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orgtest1/aldehydes/step3/reaction.map.cml

Empty file added.

orgtest1/build.lf

+(repository 	https://maven.ch.cam.ac.uk/m2repo)
+
+(depends		cml:curly-arrows:1.0-SNAPSHOT)
+(depends		pmr:crystaleye-lensfield:0.1-SNAPSHOT)
+
+(source reaction **/reaction.cml)	
+(build
+	electron	org.xmlcml.cml.crystaleye.lensfield.cml.ElectronCounter	           
+	:input 		reaction
+	:output		**/reaction.electron.cml
+	)
+	
+
+(build
+	map			org.xmlcml.cml.crystaleye.lensfield.cml.ReactionMap	           
+	:input 		electron
+	:output		**/reaction.map.cml
+	)
+
+(build
+	cmllite	org.xmlcml.cml.crystaleye.lensfield.cml.CML2CMLLiteProcessor           
+	:input 		map
+	:output		**/reaction.cmllite.cml
+	)
+	
+		
+	
+	

orgtest1/build0.lf

+(repository 	https://maven.ch.cam.ac.uk/m2repo)
+
+(depends		cml:curly-arrows:1.0-SNAPSHOT)
+(depends		pmr:crystaleye-lensfield:0.1-SNAPSHOT)
+
+	
+(source int0 		**/intermediate0.cleaned.cml)
+(source int1 		**/intermediate1.cleaned.cml)
+(source int2 		**/intermediate2.cleaned.cml)
+(source int3 		**/intermediate3.cleaned.cml)
+(source int4 		**/intermediate4.cleaned.cml)
+(source int5 		**/intermediate5.cleaned.cml)
+(source int6 		**/intermediate6.cleaned.cml)
+(source int7 		**/intermediate7.cleaned.cml)
+(build
+	reactant0	org.xmlcml.cml.crystaleye.lensfield.CopyProcessor           
+	:input 		int0
+	:output		**/step0/reactant.cml
+	)
+	
+(build
+	product0	org.xmlcml.cml.crystaleye.lensfield.CopyProcessor           
+	:input 		int1
+	:output		**/step0/product.cml
+	)	
+	
+(build
+	reactant1	org.xmlcml.cml.crystaleye.lensfield.CopyProcessor           
+	:input 		int1
+	:output		**/step1/reactant.cml
+	)
+	
+(build
+	product1	org.xmlcml.cml.crystaleye.lensfield.CopyProcessor           
+	:input 		int2
+	:output		**/step1/product.cml
+	)	
+	
+(build
+	reactant2	org.xmlcml.cml.crystaleye.lensfield.CopyProcessor           
+	:input 		int2
+	:output		**/step2/reactant.cml
+	)
+	
+(build
+	product2	org.xmlcml.cml.crystaleye.lensfield.CopyProcessor           
+	:input 		int3
+	:output		**/step2/product.cml
+	)	
+	
+(build
+	reactant3	org.xmlcml.cml.crystaleye.lensfield.CopyProcessor           
+	:input 		int3
+	:output		**/step3/reactant.cml
+	)
+	
+(build
+	product3	org.xmlcml.cml.crystaleye.lensfield.CopyProcessor           
+	:input 		int4
+	:output		**/step3/product.cml
+	)	
+	
+(build
+	reactant4	org.xmlcml.cml.crystaleye.lensfield.CopyProcessor           
+	:input 		int4
+	:output		**/step4/reactant.cml
+	)
+	
+(build
+	product4	org.xmlcml.cml.crystaleye.lensfield.CopyProcessor           
+	:input 		int5
+	:output		**/step4/product.cml
+	)	
+	
+(build
+	reactant5	org.xmlcml.cml.crystaleye.lensfield.CopyProcessor           
+	:input 		int5
+	:output		**/step5/reactant.cml
+	)
+	
+(build
+	product5	org.xmlcml.cml.crystaleye.lensfield.CopyProcessor           
+	:input 		int6
+	:output		**/step5/product.cml
+	)	
+	
+(build
+	reactant6	org.xmlcml.cml.crystaleye.lensfield.CopyProcessor           
+	:input 		int6
+	:output		**/step6/reactant.cml
+	)
+	
+(build
+	product6	org.xmlcml.cml.crystaleye.lensfield.CopyProcessor           
+	:input 		int7
+	:output		**/step6/product.cml
+	)	
+	
+; now run CrystaleyeProcessor with build1.xml
+
+	
+	

orgtest1/build00.lf

+(repository 	https://maven.ch.cam.ac.uk/m2repo)
+
+(depends		cml:curly-arrows:1.0-SNAPSHOT)
+(depends		pmr:crystaleye-lensfield:0.1-SNAPSHOT)
+
+(source cdx 		**/*.cdx)
+(build
+	raw		org.xmlcml.cml.crystaleye.lensfield.cml.CDX2CMLProcessor	           
+	:input 		cdx
+	:output		**/*.raw.cml
+	)
+	
+(build
+	cml		org.xmlcml.cml.crystaleye.lensfield.cml.AttributeRemover           
+	:input 		raw