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knepley/feature-plex-nasm

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knepley/feature-plex-nasm
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250+ commits behind master.
Matt Knepley
Plex: Fix traversal bug in DMPlexLabelAddCells()
Matt Knepley
Plex: Fixed calls to DMPlexGet/SetDImension()
Matt Knepley
Merge branch 'knepley/feature-dm-dimension-handling' into knepley/feature-plex-nasm * knepley/feature-dm-dimension-handling: (106 commits) TS ex11: Fixed calls to DMSetCoordinateSection() DM: FIxed DMClone() to copy dimension Plex+DA: Now cell geometry routine can take a PetscFE in order to evaluate at quadrature points - We evaluate isoparametrically at the quadrature points - Changed DMDAComputeCellGeometry() --> DMDAComputeCellGeometryFEM() - Changed DMPlexComputeCellGeo…
Matt Knepley
DM: Lots of NASM work - Must be pushed since my machine is dying
Matt Knepley
DMPlex+Doc: Document DMPlexInsertBoundaryValuesFEM()
Matt Knepley
DMPlex: Update to new PartitionClosure()
Matt Knepley
PetscFE: Fixed default quadrature order for tensor meshes - Make sure this is correct
Matt Knepley
DMPlex: Fix DMLabelAddCells() to be idempotent
Matt Knepley
DMPlex: Now partition closure can be made non-overlapping
Matt Knepley
Builder: Added TS ex29
Matt Knepley
DMPlex: Changed DMPlexDecompose() to return partitions, generate ISes in DMCreateDomainDecompositions_Plex() - Fixed label generation - Copy DS
Matt Knepley
Plex+HDF5: Fixed time output in xdmf
Matt Knepley
SNES ex12: Allow hex meshes - Added a NASM test - Now use options for regular refinement
Matt Knepley
Plex: Hooked up DMCreateDomainDecomposition() - Scatters do not yet work - ISes do not yet work
Matt Knepley
Plex+Doc: Fixed doc for DMPlexDistribute()
Matt Knepley
Plex: Added DMPlexDecompose() to create many small serial partitions - Use this for NASM
Matt Knepley
DMLabel: Added DMLabelDecompose() to extract a sublabel given a local partition
Matt Knepley
DM: DMRefine() gives refined mesh the same name
Matt Knepley
Plex: DMPlexCreatePartition() now takes an argument for the number of partitions - Allows multiple partitions per process