PHYLOViZ is a platform independent JAVA software that allows the analysis of sequence-based typing methods that generate allelic profiles and their associated epidemiological data.
Papers describing PHYLOViZ: PHYLOViZ 2.0: Providing scalable data integration and visualization for multiple phylogenetic inference methods, by M. Nascimento, A. Sousa, M. Ramirez A. P. Francisco, J. A. Carriço and C. Vaz. Bioinformatics, 2016. PHYLOViZ: Phylogenetic inference and data visualization for sequence based typing methods, by A. P. Francisco, C. Vaz, P. T. Monteiro, J. Melo-Cristino, M. Ramirez, and J. A. Carriço. BMC Bioinformatics, 13:87, 2012.