Package | Description |
---|---|
net.talvi.puffinplot |
net.talvi.puffinplot is a library and GUI application for plotting
and analysing palaeomagnetic data.
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net.talvi.puffinplot.data |
This package contains code to read, store, analyse, and write palaeomagnetic
data.
|
net.talvi.puffinplot.plots |
This package contains classes for plotting palaeomagnetic data.
|
net.talvi.puffinplot.window |
This package contains windows and related GUI classes for PuffinPlot.
|
Modifier and Type | Method and Description |
---|---|
Sample |
PuffinApp.getSample()
Gets the current Sample
|
Modifier and Type | Method and Description |
---|---|
java.util.List<Sample> |
PuffinApp.getAllSamplesInSelectedSites()
Gets all the samples in all the sites having at least one selected sample.
|
java.util.List<Sample> |
PuffinApp.getSelectedSamples()
Gets all the currently selected samples.
|
Modifier and Type | Method and Description |
---|---|
Sample |
Suite.getCurrentSample()
Returns the current sample
|
Sample |
ArmSampleRpiEstimate.getNormalizer() |
Sample |
MagSusSampleRpiEstimate.getNormalizer() |
Sample |
ArmSampleRpiEstimate.getNrmSample() |
Sample |
MagSusSampleRpiEstimate.getNrmSample() |
Sample |
Datum.getSample()
Returns the sample of which this measurement was made.
|
Sample |
Suite.getSampleByIndex(int i)
Returns the sample with the specified index.
|
Sample |
Suite.getSampleByName(java.lang.String name)
Returns a sample from this suite with the specified name,
or
null if no such sample exists. |
Modifier and Type | Method and Description |
---|---|
java.util.List<Sample> |
Site.getSamples()
Returns the samples in this site
|
java.util.List<Sample> |
Suite.getSamples()
Returns all the samples in this suite.
|
Modifier and Type | Method and Description |
---|---|
static PcaAnnotated |
PcaAnnotated.calculate(Sample sample,
Correction correction)
Performs principal component analysis (PCA) on the specified sample.
|
int |
Suite.getIndexBySample(Sample sample)
Returns the index of a specified sample within this suite.
|
void |
Datum.setSample(Sample v)
Sets the sample on which this measurement was made.
|
java.lang.String |
Suite.SiteNamer.siteName(Sample sample)
Determines a site name from a sample name.
|
Modifier and Type | Method and Description |
---|---|
void |
Suite.calculateAmsStatistics(java.util.List<Sample> samples,
Suite.AmsCalcType calcType,
java.lang.String scriptPath)
Calculates and stores AMS statistics using an external script.
|
void |
Suite.calculateSuiteMeans(java.util.List<Sample> selSamples,
java.util.List<Site> selSites)
Calculates Fisher statistics on all the calculated PCA
directions for samples within the suite.
|
void |
Suite.mergeDuplicateMeasurements(java.util.Collection<Sample> samples)
Merges Datum objects with the same Sample and treatment step (EXPERIMENTAL).
|
void |
Suite.setNamedSiteForSamples(java.util.Collection<Sample> samples,
java.lang.String siteName)
Explicitly sets a site for the specified samples.
|
void |
Suite.setSiteNamesByDepth(java.util.Collection<Sample> samples,
double thickness)
Sets site names for a continuous suite according to the depth of the samples.
|
void |
Suite.setSiteNamesBySubstring(java.util.Collection<Sample> samples,
java.util.BitSet charMask)
Sets site names for samples according to chosen characters from the
sample names.
|
void |
Suite.setSitesForSamples(java.util.Collection<Sample> samples,
Suite.SiteNamer siteNamer)
Sets sites for supplied samples according to a supplied site namer.
|
Constructor and Description |
---|
Site(java.lang.String name,
java.util.List<Sample> samples)
Creates a site containing the specified samples.
|
Modifier and Type | Method and Description |
---|---|
void |
SampleClickListener.sampleClicked(Sample sample)
Invoked when a sample is clicked in a plot.
|
Modifier and Type | Method and Description |
---|---|
Sample |
PlotParams.getSample()
Returns the sample to plot.
|
Modifier and Type | Method and Description |
---|---|
java.util.List<Sample> |
SampleChooser.getSelectedSamples()
Returns all the currently selected samples.
|