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A

a95 - Variable in class net.talvi.puffinplot.data.ArasonLevi.ArithMean
 
about - Variable in class net.talvi.puffinplot.PuffinActions
Opens the application's ‘About’ dialog box.
about() - Method in class net.talvi.puffinplot.PuffinApp
Shows the application's ‘About’ dialog box, giving brief information about PuffinPlot.
AboutBox - Class in net.talvi.puffinplot.window
An ‘about this program’ dialog box giving brief information about PuffinPlot.
AboutBox(PuffinApp) - Constructor for class net.talvi.puffinplot.window.AboutBox
Creates new about box.
actionPerformed(ActionEvent) - Method in class net.talvi.puffinplot.window.ControlPanel
Handles action events.
actionPerformed(ActionEvent) - Method in class net.talvi.puffinplot.window.ProgressDialog
 
actionPerformed(ActionEvent) - Method in class net.talvi.puffinplot.window.TreatmentWindow
Handle an action event.
add(int, T) - Method in class net.talvi.puffinplot.data.CustomFields
Adds a new value to this custom field list.
add(Datum) - Method in class net.talvi.puffinplot.data.Line
Associates a Datum with this line.
add(List<File>) - Method in class net.talvi.puffinplot.RecentFileList
Adds a new file-set to the top of the list.
add(RenderingHints) - Method in class net.talvi.puffinplot.window.PuffinRenderingHints
addCurrentDatumListener(CurrentDatumListener) - Method in class net.talvi.puffinplot.window.GraphDisplay
 
addDatum(Datum) - Method in class net.talvi.puffinplot.data.Sample
Adds a data point to this sample.
addDatum(Datum) - Method in class net.talvi.puffinplot.data.Suite
Adds a datum to the suite.
addDecRad(double) - Method in class net.talvi.puffinplot.data.Vec3
Returns a new vector equal to this vector with the specified angle added to the declination.
addIncRad(double) - Method in class net.talvi.puffinplot.data.Vec3
Returns a new vector equal to this vector with the specified angle added to the inclination.
addPath(Path2D, boolean) - Method in class net.talvi.puffinplot.plots.LineCache
Adds a path to this cache.
addPoint(Datum, Point2D, boolean, boolean, boolean) - Method in class net.talvi.puffinplot.plots.Plot
Adds a point to this plot's internal buffer.
addSampleClickListener(SampleClickListener) - Method in class net.talvi.puffinplot.plots.Plot
Adds a listener for sample clicks to this plot.
addSavedListener(Suite.SavedListener) - Method in class net.talvi.puffinplot.data.Suite
Add a listener for the Suite's save state
AmsData - Class in net.talvi.puffinplot.data
This class holds AMS (anisotropy of magnetic susceptibility) data for a named sample.
AmsData(String, double[], double, double, double) - Constructor for class net.talvi.puffinplot.data.AmsData
Creates a new AMS data set with the data provided.
AmsLoader - Class in net.talvi.puffinplot.data.file
Turns an AGICO .ASC AMS file into a list of AMS tensors.
AmsLoader(File) - Constructor for class net.talvi.puffinplot.data.file.AmsLoader
Creates a new AMS loader for a specified file.
AmsPlot - Class in net.talvi.puffinplot.plots
A plot which shows the principal axes of anisotropy of magnetic susceptibility (AMS) tensors, and statistical means and confidence regions for groups of tensors.
AmsPlot(GraphDisplay, PlotParams, Preferences) - Constructor for class net.talvi.puffinplot.plots.AmsPlot
Creates an AMS plot with the supplied parameters.
angleFromLast(Vec3) - Method in class net.talvi.puffinplot.data.GreatCircle
Returns the angle between the supplied direction and the last point on the great-circle fit.
angleTo(Vec3) - Method in class net.talvi.puffinplot.data.Vec3
Returns the signed angle between this vector and another vector.
appendFiles - Variable in class net.talvi.puffinplot.PuffinActions
Opens a dialog box allowing the user to choose one or more files to append to the current data suite.
AppleEventHandler - Class in net.talvi.puffinplot
AppleEventHandler handles the user actions About, Open, Preferences, and Quit on Mac OS X systems, passing them on to the appropriate methods of a PuffinApp instance specified on initialization.
applyTextAttributes(AttributedString) - Method in class net.talvi.puffinplot.plots.Plot
Applies this plot's standard text attributes to an attributed string.
ArasonLevi - Class in net.talvi.puffinplot.data
Calculate and store Arason-Levi Maximum Likelihood Estimates (MLE) for inclination-only data.
ArasonLevi.ArithMean - Class in net.talvi.puffinplot.data
Calculate and store mean inclination estimates based on a simple arithmetic mean.
areTreatmentStepsLabelled() - Method in class net.talvi.puffinplot.plots.Plot
Determines whether the points should be labelled.
areTreatmentStepsLabelled() - Method in class net.talvi.puffinplot.plots.SampleEqAreaPlot
 
areTreatmentStepsLabelled() - Method in class net.talvi.puffinplot.plots.ZPlot
 
ArmAxis - Enum in net.talvi.puffinplot.data
ArmAxis represents the axis along which an ARM (anhysteretic remanent magnetization) field has been applied.
ArmSampleRpiEstimate - Class in net.talvi.puffinplot.data
An estimate of relative palaeointensity for a single sample, normalized by ARM.
arrayLeftDivide(Matrix) - Method in class Jama.Matrix
Element-by-element left division, C = A.\B
arrayLeftDivideEquals(Matrix) - Method in class Jama.Matrix
Element-by-element left division in place, A = A.\B
arrayRightDivide(Matrix) - Method in class Jama.Matrix
Element-by-element right division, C = A./B
arrayRightDivideEquals(Matrix) - Method in class Jama.Matrix
Element-by-element right division in place, A = A./B
arrayTimes(Matrix) - Method in class Jama.Matrix
Element-by-element multiplication, C = A.*B
arrayTimesEquals(Matrix) - Method in class Jama.Matrix
Element-by-element multiplication in place, A = A.*B
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