Output qiime friendly files (labeled instead of split)

[Robert Leach]

USE CASE: WHAT DO YOU WANT TO DO?

Import the split output into qiime.

STEPS TO REPRODUCE AN ISSUE (OR TRIGGER A NEW FEATURE)

1. Supply --qiime flag

CURRENT BEHAVIOR

No qiime-compatible output mode

EXPECTED BEHAVIOR

An output split reads file that can be imported into qiime.

DEVELOPERS ONLY SECTION

SUGGESTED CHANGE (Pseudocode optional)

Look up the format taken by qiime and mimic it if the --qiime flag is supplied.

LEVEL OF EFFORT - developers only

medium

COMMENTS