1. Genomics Bioinformatics Group Avatar Genomics Bioinformatics Group
  2. barcode_splitter
  3. barcode_splitter

Issues

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Issues (1–17 of 17)

Title T P Status Votes Assignee Created Updated Actions
#34: Fastq defline parsing doesn't always work
bug minor new
#33: nosanitize argument broken
bug minor new
#26: Update galaxy wrapper to support paired-end data
enhancement minor new
#22: Put usage in the README.rst
enhancement minor new
#21: Clarify that number of mismatches is *per index read* and not total
enhancement minor new
#16: Single source versioning
enhancement minor closed
#7: Lazy-load the pre-computed barcode possibilities
enhancement minor new 1
#14: Uncaught exception when UTF8 characters written to terminal that doesn't support UTF8
bug minor resolved 1
#5: Support different number of mismatches per barcode set or 1 number of mismatches to allow the same number of mismatches for all barcode sets.
enhancement minor new
#15: Gracefully catch file not found exceptions and print a cleaner error message
bug minor closed 1
#13: Output summary samples in same order as barcodes file
proposal minor closed 1
#2: Handle case where barcode is longer than reads
bug minor closed 1
#9: Hide the index read split files in galaxy - as we do not need them
enhancement minor wontfix
#8: Update the galaxy wrapper to put reads with non-index sequence in a separate collection
enhancement minor wontfix
#3: Output qiime friendly files (labeled instead of split)
enhancement minor new
#1: Support multiple length barcodes
enhancement minor wontfix
#4: Make it threaded/parallelizable
enhancement minor new