Commits

Victor Garcia committed 584ac6e

Add Biopython results.

  • Participants
  • Parent commits ab1d4d7

Comments (0)

Files changed (3)

 == Scientific libraries
 
 === [[biopython | Biopython]]
-{{unknown.gif | Compatibility Unknown}}
+{{incompatible.gif | Incompatible}} {{moreinfo.gif | More Information}}
 \\ http://biopython.org/
 \\ Freely available tools for computational molecular biology.
 ----

File biopython.wiki

+= Biopython
+
+Biopython isn't fully compatible with PyPy. Even though many of its unittests
+pass with a PyPy nightly build, Biopython depends on [[numpy | Numpy]]
+(incompatible) for many features. Many SQLite-related tests also fail, among
+others. Biopython's C extensions fail to build with PyPy.
+
+----
+\\ URL: http://biopython.org/
+\\ Category: Scientific libraries
+\\ Compatible: {{incompatible.gif | Incompatible}}
+==== Soft Dependencies
+ * [[mysql-python | MySQL-Python (MySQLdb)]] {{compatible.gif | Compatible}} {{moreinfo.gif | More Information}}
+ * [[numpy | Numpy]] {{incompatible.gif | Incompatible}} {{moreinfo.gif | More Information}}
+ * [[psycopg2 | Psycopg2]] {{compatible.gif | Compatible}} {{moreinfo.gif | More Information}}
+ * [[http://code.google.com/p/pysqlite/ | pysqlite (sqlite3)]] {{compatible.gif | Compatible}}

File depends.yaml

 
   biopython:
     harddepends: []
-    softdepends: []
+    softdepends:
+    - mysql-python
+    - numpy
+    - psycopg2
+    - pysqlite
 
   gmpy:
     harddepends: