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ET installation problem.
Hello,
My name is Maxim. I try to get the ET from instruction in tutorial: On the step wget --no-check-certificate https://github.com/gridaphobe/CRL/raw/ET_2011_05/GetComponents chmod 755 GetComponents ./GetComponents -a http://svn.einsteintoolkit.org/manifest/branches/ET_2011_05/einsteintoolkit.th
Not all throns is downloaded.
0 components checked out. 140 components updated.
Unable to process simfactory Unable to process LSUThorns/QuasiLocalMeasures Unable to process LSUThorns/SummationByParts Unable to process LSUThorns/Vectors Unable to process KrancNumericalTools/GenericFD Unable to process McLachlan/doc Unable to process McLachlan/m Unable to process McLachlan/par Unable to process McLachlan/ML_ADMConstraints Unable to process McLachlan/ML_ADMQuantities Unable to process McLachlan/ML_BSSN Unable to process McLachlan/ML_BSSN_Helper Unable to process McLachlan/ML_BSSN_O2 Unable to process McLachlan/ML_BSSN_O2_Helper Unable to process McLachlan/ML_BSSN_Test Unable to process Carpet/doc Unable to process Carpet/Carpet Unable to process Carpet/CarpetEvolutionMask Unable to process Carpet/CarpetIOASCII Unable to process Carpet/CarpetIOBasic Unable to process Carpet/CarpetIOHDF5 Unable to process Carpet/CarpetIOScalar Unable to process Carpet/CarpetInterp Unable to process Carpet/CarpetInterp2 Unable to process Carpet/CarpetLib Unable to process Carpet/CarpetMask Unable to process Carpet/CarpetReduce Unable to process Carpet/CarpetRegrid Unable to process Carpet/CarpetRegrid2 Unable to process Carpet/CarpetSlab Unable to process Carpet/CarpetTracker Unable to process Carpet/LoopControl Unable to process GetComponents
Time Elapsed: 108 minutes, 23 seconds
I have repeat it 3 times, the result is the same. How to solve this problem?
With Best Regards, Maxim
Keyword:
Comments (16)
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Do you have git and mercurial installed on your system?
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Some other questions which might be relevant: What operating system are you using? Ubuntu 11.04 64bit
What machine are you running on? Dell Precision 2xXenons
Where are you located physically in the world? Germany
Could it be a firewall issue at your university/institute/company? Germany MPI-k Heidelberg
Do you have git and mercurial installed on your system? Yes and yes
That I download:
ls Cactus/* Cactus/CONTRIBUTORS Cactus/COPYRIGHT Cactus/Makefile
Cactus/arrangements: AEIThorns CactusConnect CactusNumerical CactusTest EinsteinAnalysis EinsteinEvolve ExternalLibraries CactusArchive CactusElliptic CactusPUGH CactusUtils EinsteinBase EinsteinInitialData README CactusBase CactusIO CactusPUGHIO CactusWave EinsteinEOS EinsteinUtils TAT
Cactus/doc: FAQ MaintGuide MigrationGuide.txt ReferenceManual ReleaseNotes UsersGuide latex MaintGuide.pdf README.Windows ReferenceManual.pdf ThornGuide UsersGuide.pdf
Cactus/lib: archlibs make sbin
Cactus/manifest: apsrev-titles.bst apsrev-titles-manyauthors.bst einsteintoolkit.bib einsteintoolkit.tex einsteintoolkit.th
Cactus/par: ks-mclachlan.par qc0-mclachlan.par static_tov.par
Cactus/repos:
Cactus/src: comm datestamp.c gnu include interface.ccl IO main make.code.defn param.ccl schedule schedule.ccl util
Cactus/utils: Benchmarks Demos NMI ParameterFiles Releases Scripts ThornLists ThornListsDev ThornListsExternal
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Could it be a firewall issue at your university/institute/company? It could be, but several throns are downloaded and updated after that.
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And what is the full output of the !GetComponents command? Was it what you sent, or is there more output?
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bmv@magnetar:/utils/soft/develop/ET$ wget --no-check-certificate https://github.com/gridaphobe/CRL/raw/ET_2011_05/GetComponents --2011-09-29 17:05:47-- https://github.com/gridaphobe/CRL/raw/ET_2011_05/GetComponents Resolving www-cache.mpi-hd.mpg.de... 149.217.1.6 Connecting to www-cache.mpi-hd.mpg.de|149.217.1.6|:3128... connected. Proxy request sent, awaiting response... 302 Found Location: https://raw.github.com/gridaphobe/CRL/ET_2011_05/GetComponents [following] --2011-09-29 17:05:47-- https://raw.github.com/gridaphobe/CRL/ET_2011_05/GetComponents Connecting to www-cache.mpi-hd.mpg.de|149.217.1.6|:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 94127 (92K) [text/plain] Saving to: `GetComponents'
100%[==============================================================================================================>] 94,127 --.-K/s in 0.1s
2011-09-29 17:05:48 (657 KB/s) - `GetComponents' saved [94127/94127]
bmv@magnetar:/utils/soft/develop/ET$ ll total 184 -rw-r--r-- 1 bmv bmv 94127 2011-09-29 17:05 GetComponents -rw-r--r-- 1 bmv bmv 94127 2011-09-29 17:05 GetComponents.txt bmv@magnetar:/utils/soft/develop/ET$ chmod 755 GetComponents bmv@magnetar:/utils/soft/develop/ET$ ll total 184 -rwxr-xr-x 1 bmv bmv 94127 2011-09-29 17:05 GetComponents -rw-r--r-- 1 bmv bmv 94127 2011-09-29 17:05 GetComponents.txt
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bmv@magnetar:/utils/soft/develop/ET$ ./GetComponents -a http://svn.einsteintoolkit.org/manifest/branches/ET_2011_05/einsteintoolkit.th ----------------------------------------------------------------- Checking out module: manifest from repository: http://svn.einsteintoolkit.org/manifest/branches/ET_2011_05 into: Cactus ----------------------------------------------------------------- Checking out module: Cactus from repository: http://svn.cactuscode.org/flesh/branches/ET_2011_05 into: Cactus as: . ----------------------------------------------------------------- Checking out module: simfactory from repository: https://svn.cct.lsu.edu/repos/numrel/simfactory/branches/ET_2011_05 into: Cactus svn: OPTIONS of 'https://svn.cct.lsu.edu/repos/numrel/simfactory/branches/ET_2011_05': could not connect to server (https://svn.cct.lsu.edu)
Warning: Could not checkout module simfactory
----------------------------------------------------------------- Checking out module: par from repository: http://svn.einsteintoolkit.org/cactus/EinsteinExamples/branches/ET_2011_05/par into: Cactus ----------------------------------------------------------------- Checking out module: . from repository: http://svn.cactuscode.org/Utilities/branches/ET_2011_05 into: Cactus as: utils ----------------------------------------------------------------- Checking out module: CactusArchive/ADM from repository: http://svn.cactuscode.org/arrangements/CactusArchive/ADM/branches/ET_2011_05 into: Cactus/arrangements ----------------------------------------------------------------- Checking out module: CactusBase/Boundary from repository: http://svn.cactuscode.org/arrangements/CactusBase/Boundary/branches/ET_2011_05 into: Cactus/arrangements
...
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----------------------------------------------------------------- Checking out module: AEIThorns/PunctureTracker from repository: http://svn.aei.mpg.de/numrel/AEIThorns/PunctureTracker/branches/ET_2011_05 into: Cactus/arrangements ----------------------------------------------------------------- Checking out module: AEIThorns/SystemStatistics from repository: http://svn.aei.mpg.de/numrel/AEIThorns/SystemStatistics/branches/ET_2011_05 into: Cactus/arrangements ----------------------------------------------------------------- Checking out module: LSUThorns/QuasiLocalMeasures from repository: https://svn.cct.lsu.edu/repos/numrel/LSUThorns/QuasiLocalMeasures/branches/ET_2011_05 into: Cactus/arrangements svn: OPTIONS of 'https://svn.cct.lsu.edu/repos/numrel/LSUThorns/QuasiLocalMeasures/branches/ET_2011_05': could not connect to server (https://svn.cct.lsu.edu)
Warning: Could not checkout module LSUThorns/QuasiLocalMeasures
----------------------------------------------------------------- Checking out module: LSUThorns/SummationByParts from repository: https://svn.cct.lsu.edu/repos/numrel/LSUThorns/SummationByParts/branches/ET_2011_05 into: Cactus/arrangements svn: OPTIONS of 'https://svn.cct.lsu.edu/repos/numrel/LSUThorns/SummationByParts/branches/ET_2011_05': could not connect to server (https://svn.cct.lsu.edu)
Warning: Could not checkout module LSUThorns/SummationByParts
----------------------------------------------------------------- Checking out module: LSUThorns/Vectors from repository: https://svn.cct.lsu.edu/repos/numrel/LSUThorns/Vectors/branches/ET_2011_05 into: Cactus/arrangements svn: OPTIONS of 'https://svn.cct.lsu.edu/repos/numrel/LSUThorns/Vectors/branches/ET_2011_05': could not connect to server (https://svn.cct.lsu.edu)
Warning: Could not checkout module LSUThorns/Vectors
----------------------------------------------------------------- Checking out module: KrancNumericalTools/GenericFD from repository: git:github.com/ianhinder/Kranc.git into: Cactus/arrangements
Warning: Could not checkout module KrancNumericalTools/GenericFD
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: McLachlan/doc from repository: git:carpetcode.org/McLachlan into: Cactus/arrangements
Warning: Could not checkout module McLachlan/doc
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: McLachlan/m from repository: git:carpetcode.org/McLachlan into: Cactus/arrangements
Warning: Could not checkout module McLachlan/m
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: McLachlan/par from repository: git:carpetcode.org/McLachlan into: Cactus/arrangements
Warning: Could not checkout module McLachlan/par
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: McLachlan/ML_ADMConstraints from repository: git:carpetcode.org/McLachlan into: Cactus/arrangements
Warning: Could not checkout module McLachlan/ML_ADMConstraints
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: McLachlan/ML_ADMQuantities from repository: git:carpetcode.org/McLachlan into: Cactus/arrangements
Warning: Could not checkout module McLachlan/ML_ADMQuantities
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: McLachlan/ML_BSSN from repository: git:carpetcode.org/McLachlan into: Cactus/arrangements
Warning: Could not checkout module McLachlan/ML_BSSN
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: McLachlan/ML_BSSN_Helper from repository: git:carpetcode.org/McLachlan into: Cactus/arrangements
Warning: Could not checkout module McLachlan/ML_BSSN_Helper
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: McLachlan/ML_BSSN_O2 from repository: git:carpetcode.org/McLachlan into: Cactus/arrangements
Warning: Could not checkout module McLachlan/ML_BSSN_O2
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: McLachlan/ML_BSSN_O2_Helper from repository: git:carpetcode.org/McLachlan into: Cactus/arrangements
Warning: Could not checkout module McLachlan/ML_BSSN_O2_Helper
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: McLachlan/ML_BSSN_Test from repository: git:carpetcode.org/McLachlan into: Cactus/arrangements
Warning: Could not checkout module McLachlan/ML_BSSN_Test
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: Carpet/doc from repository: git:carpetcode.org/carpet into: Cactus/arrangements
Warning: Could not checkout module Carpet/doc
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: Carpet/Carpet from repository: git:carpetcode.org/carpet into: Cactus/arrangements
Warning: Could not checkout module Carpet/Carpet
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: Carpet/CarpetEvolutionMask from repository: git:carpetcode.org/carpet into: Cactus/arrangements
Warning: Could not checkout module Carpet/CarpetEvolutionMask
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: Carpet/CarpetIOASCII from repository: git:carpetcode.org/carpet into: Cactus/arrangements
Warning: Could not checkout module Carpet/CarpetIOASCII
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: Carpet/CarpetIOBasic from repository: git:carpetcode.org/carpet into: Cactus/arrangements
Warning: Could not checkout module Carpet/CarpetIOBasic
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: Carpet/CarpetIOHDF5 from repository: git:carpetcode.org/carpet into: Cactus/arrangements
Warning: Could not checkout module Carpet/CarpetIOHDF5
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: Carpet/CarpetIOScalar from repository: git:carpetcode.org/carpet into: Cactus/arrangements
Warning: Could not checkout module Carpet/CarpetIOScalar
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: Carpet/CarpetInterp from repository: git:carpetcode.org/carpet into: Cactus/arrangements
Warning: Could not checkout module Carpet/CarpetInterp
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: Carpet/CarpetInterp2 from repository: git:carpetcode.org/carpet into: Cactus/arrangements
Warning: Could not checkout module Carpet/CarpetInterp2
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: Carpet/CarpetLib from repository: git:carpetcode.org/carpet into: Cactus/arrangements
Warning: Could not checkout module Carpet/CarpetLib
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: Carpet/CarpetMask from repository: git:carpetcode.org/carpet into: Cactus/arrangements
Warning: Could not checkout module Carpet/CarpetMask
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: Carpet/CarpetReduce from repository: git:carpetcode.org/carpet into: Cactus/arrangements
Warning: Could not checkout module Carpet/CarpetReduce
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: Carpet/CarpetRegrid from repository: git:carpetcode.org/carpet into: Cactus/arrangements
Warning: Could not checkout module Carpet/CarpetRegrid
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: Carpet/CarpetRegrid2 from repository: git:carpetcode.org/carpet into: Cactus/arrangements
Warning: Could not checkout module Carpet/CarpetRegrid2
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: Carpet/CarpetSlab from repository: git:carpetcode.org/carpet into: Cactus/arrangements
Warning: Could not checkout module Carpet/CarpetSlab
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: Carpet/CarpetTracker from repository: git:carpetcode.org/carpet into: Cactus/arrangements
Warning: Could not checkout module Carpet/CarpetTracker
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: Carpet/LoopControl from repository: git:carpetcode.org/carpet into: Cactus/arrangements
Warning: Could not checkout module Carpet/LoopControl
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- Checking out module: GetComponents from repository: git:github.com/gridaphobe/CRL.git into: Cactus/bin
Warning: Could not checkout module GetComponents
fatal: unable to connect a socket (Connection timed out)
----------------------------------------------------------------- 140 components checked out. 0 components updated.
Unable to process simfactory Unable to process LSUThorns/QuasiLocalMeasures Unable to process LSUThorns/SummationByParts Unable to process LSUThorns/Vectors Unable to process KrancNumericalTools/GenericFD Unable to process McLachlan/doc Unable to process McLachlan/m Unable to process McLachlan/par Unable to process McLachlan/ML_ADMConstraints Unable to process McLachlan/ML_ADMQuantities Unable to process McLachlan/ML_BSSN Unable to process McLachlan/ML_BSSN_Helper Unable to process McLachlan/ML_BSSN_O2 Unable to process McLachlan/ML_BSSN_O2_Helper Unable to process McLachlan/ML_BSSN_Test Unable to process Carpet/doc Unable to process Carpet/Carpet Unable to process Carpet/CarpetEvolutionMask Unable to process Carpet/CarpetIOASCII Unable to process Carpet/CarpetIOBasic Unable to process Carpet/CarpetIOHDF5 Unable to process Carpet/CarpetIOScalar Unable to process Carpet/CarpetInterp Unable to process Carpet/CarpetInterp2 Unable to process Carpet/CarpetLib Unable to process Carpet/CarpetMask Unable to process Carpet/CarpetReduce Unable to process Carpet/CarpetRegrid Unable to process Carpet/CarpetRegrid2 Unable to process Carpet/CarpetSlab Unable to process Carpet/CarpetTracker Unable to process Carpet/LoopControl Unable to process GetComponents
Time Elapsed: 118 minutes, 50 seconds
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I have remove some output, because the system treat it as a spam.
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To avoid that problem, you can put the information in a text file and add the text file as an attachment to the ticket by clicking on the "Attach file" button under the ticket summary at the top of the page.
From the output you send, it looks like you are having trouble connecting to the svn server svn.cct.lsu.edu. (In future, it would save time if you could attach all the output of the command that fails to the ticket, as often the cause of the error is printed to the screen, as in this case)
svn: OPTIONS of ' https://svn.cct.lsu.edu/repos/numrel/simfactory/branches/ET_2011_05': could not connect to server ( https://svn.cct.lsu.edu) Warning: Could not checkout module simfactory
Can you ping the server?
ping svn.cct.lsu.edu
This has happened to me in the past with this server, but it usually fixes itself after a short time. But you said you have tried several times and the same problem occurs.
To test just this problem, you can do
svn checkout https://svn.cct.lsu.edu/repos/numrel/simfactory/branches/ET_2011_05 simfactory
and see if it works. It might be a routing problem between you and the CCT server. It works from the MPI Potsdam.
I also happen to have a Ubuntu 11.04 virtual machine on my laptop, and it works fine from that, so it's not a problem with the Ubuntu SVN client (though that was quite unlikely, I started this test before you sent the full output).
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Thanks for answer.
The server svn.cct.lsu.edu is not ping.
$ ping svn.cct.lsu.edu PING asylum-b.cct.lsu.edu (130.39.21.11) 56(84) bytes of data.
^C --- asylum-b.cct.lsu.edu ping statistics --- 52 packets transmitted, 0 received, 100% packet loss, time 51005ms
I will try to download from home PC, may be it will helps.
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$ svn checkout https://svn.cct.lsu.edu/repos/numrel/simfactory/branches/ET_2011_05 simfactory svn: OPTIONS of 'https://svn.cct.lsu.edu/repos/numrel/simfactory/branches/ET_2011_05': could not connect to server (https://svn.cct.lsu.edu)
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Unfortunately it looks like ping is not a reliable diagnostic in 2011. Some network administrators think it is a good idea to block ping, even though this violates internet standards and makes troubleshooting very difficult. From my laptop:
MacBook-2:temp $ svn checkout https://svn.cct.lsu.edu/repos/numrel/simfactory/branches/ET_2011_05 simfactory A simfactory/udb.example.pm A simfactory/QUEUE A simfactory/adcirc A simfactory/adcirc/metadata A simfactory/adcirc/dateparser.py ...
but
MacBook-2:temp $ ping svn.cct.lsu.edu PING asylum-b.cct.lsu.edu (130.39.21.11): 56 data bytes Request timeout for icmp_seq 0 Request timeout for icmp_seq 1
I don't know where the ping is being blocked, but that looks to be a separate problem.
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The server svn.cct.lsu.edu is closed for me as for ping as for svn.
$ svn checkout https://svn.cct.lsu.edu/repos/numrel/simfactory/branches/ET_2011_05 simfactory svn: OPTIONS of 'https://svn.cct.lsu.edu/repos/numrel/simfactory/branches/ET_2011_05': could not connect to server (https://svn.cct.lsu.edu)
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I have check at home PC.
173 components checked out successfully. 0 components updated successfully.
Time Elapsed: 14 minutes, 35 seconds
It looks fine, so the problem in Institute firewall. I am sorry for inconvenience. Maxim
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Is that the whole output of !GetComponents, or does it also print other text? When I try the same as you, I get:
[ianhin@sl-18 temp]$ wget --no-check-certificate https://github.com/gridaphobe/CRL/raw/ET_2011_05/GetComponents --2011-09-30 15:12:35-- https://github.com/gridaphobe/CRL/raw/ET_2011_05/GetComponents Resolving github.com... 207.97.227.239 Connecting to github.com|207.97.227.239|:443... connected. HTTP request sent, awaiting response... 302 Found Location: https://raw.github.com/gridaphobe/CRL/ET_2011_05/GetComponents [following] --2011-09-30 15:12:35-- https://raw.github.com/gridaphobe/CRL/ET_2011_05/GetComponents Resolving raw.github.com... 207.97.227.243 Connecting to raw.github.com|207.97.227.243|:443... connected. HTTP request sent, awaiting response... 200 OK Length: 94127 (92K) [text/plain] Saving to: “GetComponents”
100%[=========================================================================================================>] 94,127 457K/s in 0.2s
2011-09-30 15:12:36 (457 KB/s) - “GetComponents” saved [94127/94127]
[ianhin@sl-18 temp]$ chmod 755 GetComponents [ianhin@sl-18 temp]$ ./GetComponents -a http://svn.einsteintoolkit.org/manifest/branches/ET_2011_05/einsteintoolkit.th ----------------------------------------------------------------- Checking out module: manifest from repository: http://svn.einsteintoolkit.org/manifest/branches/ET_2011_05 into: Cactus ----------------------------------------------------------------- Checking out module: Cactus from repository: http://svn.cactuscode.org/flesh/branches/ET_2011_05 into: Cactus as: . ... I have not waited for it to finish, but it seems to work for me. Did GetComponents create a Cactus directory? Is there anything inside it?
Some other questions which might be relevant: