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Issue #288 wontfix
I installed rpy2-bioconductor-extensions. When I try to import
bioc, I get this error:
>>> from bioc import edger Error in as.environment(where) : no item called "None" on the search list Traceback (most recent call last): File "<stdin>", line 1, in <module> File "/Users/yarden/anaconda/lib/python2.7/site-packages/bioc/edger.py", line 69, in <module> class DeDGEList(vectors.Vector): File "/Users/yarden/anaconda/lib/python2.7/site-packages/rpy2/robjects/methods.py", line 154, in __new__ cls_def = getclassdef(cls_rname, cls_rpackagename) File "/Users/yarden/anaconda/lib/python2.7/site-packages/rpy2/robjects/methods.py", line 80, in getclassdef StrSexpVector((cls_packagename, ))) rpy2.rinterface.RRuntimeError: Error in as.environment(where) : no item called "None" on the search list
I'm using this Python version on Mac OS X:
Python 2.7.8 |Anaconda 2.1.0 (x86_64)| (default, Aug 21 2014, 15:21:46) [GCC 4.2.1 (Apple Inc. build 5577)] on darwin
Is this a known bug? I'm using the latest rpy2-bioconductor-extensions and rpy2-2.5.6. Thank you.