1. rpy2
  2. rpy2
  3. rpy2
  4. Issues


Issue #416 new

rmagic not displaying output in jupyter python notebook

Michael Kaminsky
created an issue

This is copied from this issue on the jupyter notebook github repo. (I'm running macOS Sierra, so I don't believe this is a duplicate of some the windows-related issues I've seen on this repository.)

When I'm using rmagic to run models in R in the midst of my python notebook, the R output is getting sent to stdout (visible where my notebook server is running) but I can't get it to display the output in my notebook.

A notebook with these two cells should reproduce the issue.

# Setup
import rpy2
%load_ext rpy2.ipython

Run a model:

X <-c(1,4,5,7)
Y <- c(2,4,3,9)

Thomas Kluyver recommended I bring this up with y'all. I'm happy to dig in and do some work on this if someone can point me in the right direction (I'm not a super-experienced developer, but happy to give it a shot.)

Comments (3)

  1. Log in to comment