Commits

Author Commit Message Labels Comments Date
Johannes Köster
Allow imports from the directory where the Snakefile resides. Plus a corresponding unit test.
Johannes Köster
Minor.
Johannes Köster
Merge branch 'ruledeps' Conflicts: snakemake/workflow.py
Johannes Köster
Allow wildcards in subworkflow targets.
Johannes Köster
Accept list for subworkflow target.
Johannes Köster
Minor.
Johannes Köster
Minor.
Johannes Köster
Minor.
Johannes Köster
Support access to rules from Snakemake and allow to use them as dependencies, e.g. by referring their output files.
Johannes Köster
Merge branch 'master' of bitbucket.org:johanneskoester/snakemake
Johannes Köster
Normalize path before searching for pattern (solves windows-specific error).
Johannes Köster
Merge branch 'cluster-improvements' Conflicts: snakemake/parser.py
Johannes Köster
Raise error if input function returns the wrong data type.
Johannes Köster
Making bash completion faster.
Johannes Köster
Only output bash completion code. Else it won't be registered in current shell.
Johannes Köster
Fixed comma detection and made token detection more robust.
Johannes Köster
Provide a customized bash completion that also proposes rule names and file names.
Johannes Köster
Merge branch 'master' of bitbucket.org:johanneskoester/snakemake
Johannes Köster
Use bufsize=-1 fur processes to increase performance.
Johannes Köster
Shell completion and cleanup of setup script.
Johannes Köster
Simplified logging decoration.
Johannes Köster
Removed accidentally commited debugging code.
Johannes Köster
Merged in daler/snakemake (pull request #4) Timestamps in log Thanks Ryan!
Ryan Dale
minor simplification
Ryan Dale
add optional timestamp to logging output
Ryan Dale
Merged johanneskoester/snakemake into master
Johannes Köster
Added function glob_wildcards
Johannes Köster
Version bump.
Johannes Köster
Fixed a NonType error occuring if an input function returns more than one file.
Johannes Köster
Version bump
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