Improve the C code organization

Issue #40 new
Sean Kauffman repo owner created an issue
  • The R and Python C interface code should be moved to their separate subdirectories
  • File sizes in general are too large and should be broken up

    • for example, functions for printing/logging could be moved out into separate files
  • Some larger functions should be broken up

    • this is particularly bad among functions with internal state machines

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