Commits

Aleš Erjavec committed 6778e02

Added new icons by Peter Cuhalev and replaced existing ones with expanded paths.

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Files changed (44)

_bioinformatics/widgets/OWBioMart.py

 <description>Query BioMart service</description>
 <contact>Ales Erjavec (ales.erjavec(@at@)fri.uni-lj.si</contact>
 <priority>2010</priority>
-<icon>icons/BioMart.png</icon>
+<icon>icons/BioMart.svg</icon>
 """
 
 from __future__ import absolute_import

_bioinformatics/widgets/OWDicty.py

 """
 <name>dictyExpress</name>
 <description>Access to data in dictyExpress database.</description>
-<icon>icons/dictyExpress.png</icon>
+<icon>icons/DictyExpress.svg</icon>
 <priority>40</priority>
 """
 

_bioinformatics/widgets/OWDisplayProfiles.py

 <name>Data Profiles</name>
 <description>Visualization of data profiles (e.g., time series).</description>
 <contact>Tomaz Curk</contact>
-<icon>icons/ExpressionProfiles.png</icon>
+<icon>icons/ExpressionProfiles.svg</icon>
 <priority>1030</priority>
 """
 

_bioinformatics/widgets/OWFeatureSelection.py

 <name>Gene Selection</name>
 <description>Gene differential expression scoring and selection.</description>
 <priority>1010</priority>
-<icon>icons/FeatureSelection.png</icon>
+<icon>icons/GeneSelection.svg</icon>
 """
 
 from __future__ import absolute_import, with_statement

_bioinformatics/widgets/OWGEODatasets.py

 <description>Access to Gene Expression Omnibus data sets.</description>
 <priority>20</priority>
 <contact>Ales Erjavec (ales.erjavec(@at@)fri.uni-lj.si)</contact>
-<icon>icons/GEODataSets.png</icon>
+<icon>icons/GEODataSets.svg</icon>
 """
 
 from __future__ import absolute_import, with_statement

_bioinformatics/widgets/OWGOEnrichmentAnalysis.py

 <name>GO Browser</name>
 <description>Enrichment analysis for Gene Ontology terms.</description>
 <contact>Ales Erjavec</contact>
-<icon>icons/GO Browser.svg</icon>
+<icon>icons/GOBrowser.svg</icon>
 <priority>2020</priority>
 """
 

_bioinformatics/widgets/OWGeneAtlasTissueExpression.py

 """
 <name>Gene Atlas Tissue Expression</name>
 <description></description>
-<icon>icons/Gene Expression Atlas.svg</icon>
+<icon>icons/GeneExpressionAtlas.svg</icon>
 """
 
 from __future__ import absolute_import

_bioinformatics/widgets/OWGeneInfo.py

 <description>Displays gene information from NCBI and other sources.</description>
 <priority>2010</priority>
 <contact>Ales Erjavec (ales.erjavec(@at@)fri.uni-lj.si)</contact>
-<icon>icons/Gene Info.svg</icon>
+<icon>icons/GeneInfo.svg</icon>
 """
 
 from __future__ import absolute_import, with_statement

_bioinformatics/widgets/OWGeneMania.py

 """<name>GeneMANIA</name>
-<icon>icons/GeneMANIA.png</icon>
+<icon>icons/GeneMANIA.svg</icon>
 """
 
 from __future__ import absolute_import

_bioinformatics/widgets/OWGenotypeDistances.py

 """<name>Genotype Distances</name>
 <description>Compute distances between expression profiles of different experimental factors.</description>
-<icon>icons/GenotypeDistances.png</icon>
+<icon>icons/GenotypeDistances.svg</icon>
 <priority>1050</priority>
 <contact>Ales Erjavec (ales.erjavec(@at@).fri.uni-lj.si)</contact>
 """

_bioinformatics/widgets/OWGsea.py

 <description>Gene set enrichment analysis.</description>
 <contact>Marko Toplak (marko.toplak(@at@)gmail.com)</contact>
 <priority>2025</priority>
-<icon>icons/GSEA.png</icon>
+<icon>icons/GSEA.svg</icon>
 """
 
 from __future__ import absolute_import, with_statement

_bioinformatics/widgets/OWKEGGPathwayBrowser.py

 <name>KEGG Pathways</name>
 <description>Browse KEGG pathways that include an input set of genes.</description>
 <priority>2030</priority>
-<icon>icons/KEGG Pathways.svg</icon>
+<icon>icons/KEGGPathways.svg</icon>
 """
 
 from __future__ import absolute_import, with_statement 

_bioinformatics/widgets/OWMAPlot.py

 """<name>MA Plot</name>
 <description>Normalize expression array data on a MA - plot</description>
-<icon>icons/Normalize.png</icons>
+<icon>icons/MAPlot.svg</icon>
 """
 
 from __future__ import absolute_import

_bioinformatics/widgets/OWMeSHBrowser.py

 """
 <name>MeSH Browser</name>
 <description>Browse MeSH ontology.</description>
-<icon>icons/MeSH.png</icon>
+<icon>icons/MeSHBrowser.svg</icon>
 <contact>Crt Gorup (crt.gorup@gmail.com)</contact> 
 <priority>2040</priority>
 """

_bioinformatics/widgets/OWMoleculeVisualizer.py

 """<name>Molecule Visualizer</name>
 <description>Rendering of 2D structure of molecules based on their SMILES description.</description>
-<icon>icons/MoleculeVisualizer.png</icon>
+<icon>icons/MoleculeVisualizer.svg</icon>
 <contact>Ales Erjavec (ales.erjavec(@at@)fri.uni-lj.si)</contact> 
 <priority>2050</priority>
 """

_bioinformatics/widgets/OWPIPA.py

 """
 <name>PIPA</name>
 <description>Access data from PIPA RNA-Seq database.</description>
-<icon>icons/PIPA.png</icon>
+<icon>icons/PIPA.svg</icon>
 <priority>30</priority>
 """
 

_bioinformatics/widgets/OWPIPAx.py

 """
 <name>PIPAx</name>
 <description>Access data from PIPA RNA-Seq database.</description>
-<icon>icons/PIPA.png</icon>
+<icon>icons/PIPA.svg</icon>
 <priority>35</priority>
 """
 

_bioinformatics/widgets/OWQualityControl.py

 """
 <name>Quality Control</name>
 <description>Experiment quality control</description>
+<icon>icons/QualityControl.svg</icon>
 
 """
 

_bioinformatics/widgets/OWSetEnrichment.py

 """<name>Gene Set Enrichment</name>
+<icon>icons/GeneSetEnrichment.svg</icon>
 """
 
 from __future__ import absolute_import, with_statement

_bioinformatics/widgets/OWVulcanoPlot.py

 <description>Plots fold change vs. p-value.)</description>
 <priority>1020</priority>
 <contact>Ales Erjavec (ales.erjavec@fri.uni-lj.si)</contact>
-<icon>icons/VulcanoPlot.png</icon>
+<icon>icons/VulcanoPlot.svg</icon>
 """
 
 from __future__ import absolute_import
Add a comment to this file

_bioinformatics/widgets/icons/BioMart.svg

Added
New image
+<?xml version="1.0" encoding="utf-8"?>
+<!-- Generator: Adobe Illustrator 16.1.0, SVG Export Plug-In . SVG Version: 6.00 Build 0)  -->
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+<svg version="1.1" id="Layer_1" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink" x="0px" y="0px"
+	 width="48px" height="48px" viewBox="0 0 48 48" enable-background="new 0 0 48 48" xml:space="preserve">
+<g>
+	<g>
+		<path fill="#B3B3B3" d="M22.417,9.807c-0.383-1.612-2.002-2.608-3.613-2.225c-1.611,0.385-2.606,2.002-2.222,3.615
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+	</g>
+	<g>
+		<path fill="#333333" d="M31.417,9.807c-0.383-1.612-2.002-2.608-3.613-2.225c-1.611,0.385-2.606,2.002-2.222,3.615
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+	</g>
+	<g>
+		<path fill="#333333" d="M31.417,18.807c-0.383-1.612-2.002-2.608-3.613-2.225c-1.611,0.385-2.606,2.002-2.222,3.615
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+	<g>
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+	</g>
+	<g>
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+	</g>
+	<g>
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+	</g>
+	<g>
+		<path fill="#808080" d="M22.417,27.807c-0.383-1.612-2.002-2.608-3.613-2.225c-1.611,0.385-2.606,2.002-2.222,3.615
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+	</g>
+	<g>
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+	<g>
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+	<g>
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+	</g>
+	<g>
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+	</g>
+	<g>
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+	</g>
+</g>
+</svg>
Add a comment to this file

_bioinformatics/widgets/icons/DictyExpress.svg

Added
New image
+<?xml version="1.0" encoding="utf-8"?>
+<!-- Generator: Adobe Illustrator 16.1.0, SVG Export Plug-In . SVG Version: 6.00 Build 0)  -->
+<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN" "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">
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Add a comment to this file

_bioinformatics/widgets/icons/ExpressionProfiles.svg

Added
New image
+<?xml version="1.0" encoding="utf-8"?>
+<!-- Generator: Adobe Illustrator 16.1.0, SVG Export Plug-In . SVG Version: 6.00 Build 0)  -->
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