Merged in 4.x (pull request #227)
Added initial empty KubernetesExecutor.
Start working on the executor.
Implement wait, cancel and run.
Fixes.
Store source files as secrets.
Also register configfiles.
Pass source files and env variables as secrets.
Directly use a kubernetes pod instead of a kubernetes job.
Update snakemake file ending in FAQ.
Initial implementation.
Rewrite GS remote provider to use the google cloud API.
This provides more convenient authentication. All one needs to do is executing
$ gcloud auth application-default login
before running Snakemake.
Update docs.
Enable test case.
Add dependencies.
Only check mtime.
Skip test completely because of missing credentials.
Ignore test if not authenticated.
Minor.
Debugging.
Add authentication.
Choose right image.
Add test case.
Documentation.
Handle local rules.
Use 4.x container.
Mention how to delete the cluster.
Reduce the number of metadata files by a factor of 10.
This is achieved by storing all metadata in json, in a single file per output file.
Cleanup.
Propagate printshellcmds to scripts.
Gracefully handle PC_NAME_MAX problems on network drives (it can be zero).
minor refactor of remote/init.py to allow protocol to be passed in kwargs, add webdav to docs, add webdav exception
add webdav provider based on aioeasywebdav
Added initial empty KubernetesExecutor.
Start working on the executor.
Implement wait, cancel and run.
Fixes.
Fixes.
Store source files as secrets.
Also register configfiles.
Pass source files and env variables as secrets.
Directly use a kubernetes pod instead of a kubernetes job.
Fixes.
Update snakemake file ending in FAQ.
Fixes.
Initial implementation.
Rewrite GS remote provider to use the google cloud API.
This provides more convenient authentication. All one needs to do is executing
$ gcloud auth application-default login
before running Snakemake.
Update docs.
Enable test case.
Add dependencies.
Only check mtime.
Skip test completely because of missing credentials.
Ignore test if not authenticated.
Minor.
Debugging.
Debugging.
Add authentication.
Fixes.
Choose right image.
Minor.
Add test case.
Documentation.
Documentation.
Handle local rules.
Use 4.x container.
Mention how to delete the cluster.
Reduce the number of metadata files by a factor of 10.
This is achieved by storing all metadata in json, in a single file per output file.
Cleanup.
Propagate printshellcmds to scripts.
Gracefully handle PC_NAME_MAX problems on network drives (it can be zero).
minor refactor of remote/init.py to allow protocol to be passed in kwargs, add webdav to docs, add webdav exception
add webdav provider based on aioeasywebdav