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Pierre-Marc Jodoin VITAL pre-commit file by Frederic B-Charron. Copy file in VITALAB_AI_FOLDER/.git/hooks/pre-commit and chmod +x

Created by Pierre-Marc Jodoin
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File pre-commit Added

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+#!/usr/bin/env python
+import subprocess
+import sys
+
+def get_staged():
+    proc = subprocess.Popen(['git', 'diff', '--name-only', '--cached'], stdout=subprocess.PIPE)
+    staged_files = proc.stdout.readlines()
+    staged_files = [f.decode('utf-8') for f in staged_files]
+    staged_files = [f.strip() for f in staged_files]
+    staged_files = [f for f in staged_files if f.endswith('.py')]
+    return staged_files
+
+def main():
+    abort = False
+    staged = get_staged()
+    print("RUNNING PEP8")
+    try:
+        out = subprocess.check_output((sys.executable, '-m', 'pytest', '--pep8',
+                                       '-m',  'pep8', '-n0', *staged),
+                                stderr=subprocess.STDOUT)
+    except subprocess.CalledProcessError as e:
+        out = e.stdout
+    out = out.decode('utf8')
+    print(out)
+    if 'FAILURES' in out:
+        abort = True
+
+    print("Running Tests")
+    try:
+        out = subprocess.check_output((sys.executable, '-m', 'pytest', 'tests'),
+                                stderr=subprocess.STDOUT)
+    except subprocess.CalledProcessError as e:
+        out = e.stdout
+    out = out.decode('utf8')
+    print(out)
+    if 'FAILURE' in out:
+        abort = True
+
+    if abort:
+        sys.exit(1)
+    else:
+        sys.exit(0)
+
+if __name__ == '__main__':
+    main()
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