Chromosome PositionID avgDepth minorDepthProp minor2DepthProp gapDepthProp propCovered propCovered2 taxaCntWithMinorAlleleGE2 genotypeCnt minorAlleleFreqGE2 hetFreq_DGE2 inbredF_DGE2 10 7109411 3.234042553 0.496710526 0 0 0.712765957 0.574468085 20 54 0.361111111 1 0.959866221 10 6403108 1.64893617 0.303225806 0 0.303225806 0.585106383 0.393617021 11 37 0.297297297 0 1 10 2144699 1.372340426 0.364341085 0 0 0.478723404 0.361702128 13 34 0.397058824 1 0.938572719 10 7109408 1.5 0.425531915 0 0 0.553191489 0.319148936 13 30 0.416666667 1 0.931428571 10 13562370 1.64893617 0.303225806 0 0.303225806 0.585106383 0.393617021 11 37 0.297297297 0 1 10 18665645 1.138297872 0.429906542 0 0 0.372340426 0.287234043 12 27 0.425925926 1 0.924263675 10 6071674 1.478723404 0.45323741 0 0 0.521276596 0.361702128 16 34 0.485294118 3 0.823376623 10 10147702 0.904255319 0.317647059 0 0 0.436170213 0.234042553 7 22 0.340909091 3 0.696551724 10 5764963 1.159574468 0.458715596 0 0 0.617021277 0.276595745 11 26 0.461538462 2 0.845238095 10 7109414 4.776595745 0.483296214 0 0 0.85106383 0.734042553 33 69 0.463768116 4 0.883445946 10 16036293 1.64893617 0.303225806 0 0.303225806 0.585106383 0.393617021 11 37 0.297297297 0 1 10 14894090 1.308510638 0.471544715 0 0 0.510638298 0.329787234 13 31 0.435483871 1 0.934391534 10 7498884 0.776595745 0.342465753 0 0 0.393617021 0.223404255 6 21 0.285714286 2 0.766666667 10 7498896 1.723404255 0.358024691 0 0.358024691 0.563829787 0.425531915 14 40 0.35 2 0.89010989 10 605151 1.723404255 0.358024691 0 0 0.563829787 0.425531915 14 40 0.35 2 0.89010989 10 7109417 6.723404255 0.476265823 0 0 0.893617021 0.819148936 35 77 0.441558442 2 0.947332421 10 15805603 1.64893617 0.303225806 0 0.303225806 0.585106383 0.393617021 11 37 0.297297297 0 1 10 3133011 0.553191489 0.365384615 0 0 0.372340426 0.138297872 5 13 0.384615385 0 1 10 4740331 2.074468085 0.153846154 0 0 0.64893617 0.468085106 7 44 0.136363636 10 0.035087719 10 4470323 0.904255319 0.258823529 0 0 0.404255319 0.223404255 5 21 0.261904762 5 0.384164223 10 2764506 1.723404255 0.37654321 0 0 0.510638298 0.414893617 15 39 0.397435897 1 0.94646534 10 7109423 1.829787234 0.406976744 0 0 0.595744681 0.468085106 18 44 0.420454545 1 0.95336513 10 7109420 1.64893617 0.303225806 0 0.303225806 0.585106383 0.393617021 11 37 0.297297297 0 1 10 2144693 1.64893617 0.303225806 0 0.303225806 0.585106383 0.393617021 11 37 0.297297297 0 1 10 9477713 1.5 0.425531915 0 0 0.553191489 0.319148936 13 30 0.416666667 1 0.931428571 10 6072410 1.489361702 0.371428571 0 0 0.521276596 0.361702128 13 34 0.382352941 0 1 10 3761013 1.978723404 0.456989247 0 0.456989247 0.627659574 0.436170213 21 41 0.524390244 1 0.95110316 10 5485234 0.957446809 0.422222222 0 0.422222222 0.255319149 0.180851064 9 17 0.470588235 8 0.055555556 10 10249927 1.212765957 0.464912281 0 0.535087719 0.446808511 0.265957447 12 25 0.48 0 1 10 5591965 1.127659574 0.433962264 0 0.566037736 0.414893617 0.287234043 12 27 0.444444444 0 1 10 4750097 2.234042553 0.471428571 0 0 0.638297872 0.510638298 21 48 0.447916667 3 0.873628785 10 19652461 1.35106383 0.409448819 0 0 0.414893617 0.340425532 13 32 0.40625 0 1 10 7107894 0.691489362 0.369230769 0 0 0.372340426 0.180851064 8 17 0.470588235 0 1 10 7109426 2.35106383 0.411764706 0 0 0.680851064 0.521276596 26 49 0.530612245 2 0.918060201 10 10249930 1.64893617 0.303225806 0 0.303225806 0.585106383 0.393617021 11 37 0.297297297 0 1 10 4750100 1.127659574 0.433962264 0 0.566037736 0.414893617 0.287234043 12 27 0.444444444 0 1 10 6381410 1.35106383 0.409448819 0 0 0.414893617 0.340425532 13 32 0.40625 0 1 10 4997635 1.414893617 0.383458647 0 0.383458647 0.553191489 0.329787234 12 31 0.387096774 2 0.864035088 10 1150397 6.680851064 0.068471338 0 0 0.85106383 0.819148936 5 77 0.032467532 5 -0.033557047 10 14894069 1.904255319 0.055865922 0 0 0.64893617 0.478723404 2 45 0.044444444 0 1 10 5591962 0.776595745 0.342465753 0 0 0.393617021 0.223404255 6 21 0.285714286 2 0.766666667 10 3761010 2.234042553 0.471428571 0 0 0.638297872 0.510638298 21 48 0.447916667 3 0.873628785 10 4594267 0.957446809 0.422222222 0 0.422222222 0.255319149 0.180851064 9 17 0.470588235 8 0.055555556 10 5010713 1.244680851 0.478632479 0 0 0.478723404 0.287234043 13 27 0.462962963 1 0.925517241 10 4740352 2.308510638 0.152073733 0 0.152073733 0.627659574 0.446808511 3 42 0.071428571 0 1 10 16359855 0.904255319 0.258823529 0 0.258823529 0.404255319 0.223404255 5 21 0.261904762 5 0.384164223 10 4696546 2.436170213 0.331877729 0 0 0.64893617 0.5 20 47 0.414893617 3 0.868531469 10 3165591 1.287234043 0.495867769 0 0.495867769 0.489361702 0.382978723 18 36 0.513888889 1 0.944401544 10 17682572 9.989361702 0.406815761 0 0 0.882978723 0.79787234 34 75 0.26 35 -0.212751213 10 19651671 1.425531915 0.455223881 0 0 0.574468085 0.382978723 16 36 0.458333333 1 0.944055944 10 2651013 0.542553191 0.490196078 0 0 0.287234043 0.138297872 6 13 0.461538462 0 1 10 10290041 2.489361702 0.482905983 0 0 0.680851064 0.542553191 28 51 0.529411765 2 0.921296296 10 9477722 2.074468085 0.097435897 0 0 0.446808511 0.382978723 6 36 0.166666667 0 1 10 16365474 1.489361702 0.371428571 0 0 0.521276596 0.361702128 13 34 0.382352941 0 1 10 10249936 1 0.489361702 0 0 0.446808511 0.265957447 11 25 0.46 1 0.919484702 10 2683204 1.127659574 0.433962264 0 0 0.414893617 0.287234043 12 27 0.444444444 0 1 10 10199398 2.723404255 0.02734375 0 0.02734375 0.765957447 0.574468085 2 54 0.027777778 1 0.657142857 10 5875793 1.829787234 0.430232558 0 0 0.468085106 0.382978723 14 36 0.388888889 2 0.883116883 10 5402816 0.446808511 0.452380952 0 0 0.319148936 0.095744681 4 9 0.444444444 0 1 10 4874050 0.617021277 0.189655172 0 0 0.319148936 0.180851064 2 17 0.117647059 2 0.433333333 10 2764524 2.021276596 0.473684211 0 0 0.680851064 0.446808511 20 42 0.476190476 0 1 10 10200879 1.829787234 0.406976744 0 0 0.595744681 0.468085106 18 44 0.420454545 1 0.95336513 10 4589022 3.563829787 0.456716418 0 0 0.755319149 0.638297872 26 60 0.425 5 0.829497016 10 14006881 1.925531915 0.281767956 0 0 0.585106383 0.393617021 11 37 0.283783784 1 0.933513028 10 7933300 2.212765957 0.471153846 0 0 0.638297872 0.457446809 26 43 0.581395349 2 0.904444444 10 9589740 0.393617021 0.405405405 0 0 0.223404255 0.127659574 4 12 0.333333333 0 1 10 4874002 0.287234043 0.37037037 0 0 0.212765957 0.063829787 2 6 0.333333333 0 1 10 5117426 1.914893617 0.488888889 0 0.488888889 0.638297872 0.446808511 19 42 0.452380952 0 1 10 4753038 0.531914894 0.14 0 0 0.308510638 0.127659574 2 12 0.208333333 1 0.747368421 10 3165615 0.723404255 0.176470588 0 0 0.319148936 0.170212766 2 16 0.125 0 1 10 5113375 11.46808511 0.42393321 0 0 0.882978723 0.808510638 34 76 0.230263158 35 -0.299145299 10 7471890 1.861702128 0.222857143 0 0.777142857 0.521276596 0.361702128 10 34 0.264705882 14 -0.057777778 10 10296414 1.255319149 0.338983051 0 0 0.489361702 0.340425532 13 32 0.390625 1 0.934358974 10 4169270 0.840425532 0.303797468 0 0.303797468 0.5 0.191489362 6 18 0.333333333 0 1 10 3760998 1.734042553 0.466257669 0 0 0.468085106 0.329787234 20 31 0.596774194 17 -0.139459459 10 7161128 0.957446809 0.422222222 0 0.422222222 0.255319149 0.180851064 9 17 0.470588235 8 0.055555556 10 2785878 1.680851064 0.379746835 0 0 0.574468085 0.372340426 14 35 0.414285714 1 0.941126997 10 6075764 1.936170213 0.467032967 0 0 0.521276596 0.425531915 17 40 0.425 0 1 10 5113372 0.70212766 0.409090909 0 0.409090909 0.329787234 0.14893617 6 14 0.392857143 1 0.85026738 10 4874005 1.861702128 0.222857143 0 0.777142857 0.521276596 0.361702128 10 34 0.264705882 14 -0.057777778 10 8805914 1.914893617 0.488888889 0 0.488888889 0.638297872 0.446808511 19 42 0.452380952 0 1 10 2840111 1.5 0.368794326 0 0 0.627659574 0.425531915 15 40 0.3875 1 0.947333772 10 4750420 1.521276596 0.293706294 0 0 0.585106383 0.414893617 12 39 0.320512821 1 0.941132075 10 6075761 0.627659574 0.152542373 0 0.152542373 0.223404255 0.138297872 2 13 0.153846154 0 1 10 3165609 0.70212766 0.409090909 0 0.409090909 0.329787234 0.14893617 6 14 0.392857143 1 0.85026738 10 5113378 11.46808511 0.234693878 0 0 0.882978723 0.808510638 39 76 0.526315789 6 0.841666667 10 3760995 1.861702128 0.222857143 0 0.777142857 0.521276596 0.361702128 10 34 0.264705882 14 -0.057777778 10 5117432 0.957446809 0.422222222 0 0 0.255319149 0.180851064 9 17 0.470588235 8 0.055555556 10 4588714 0.531914894 0.14 0 0 0.308510638 0.127659574 2 12 0.208333333 1 0.747368421 10 3761004 1.446808511 0.301470588 0 0 0.585106383 0.35106383 10 33 0.303030303 0 1 10 4698817 0.957446809 0.422222222 0 0.422222222 0.255319149 0.180851064 9 17 0.470588235 8 0.055555556 10 10284796 5.287234043 0.430583501 0 0 0.787234043 0.712765957 31 67 0.440298507 3 0.909152542 10 3761007 0.893617021 0.297619048 0 0 0.425531915 0.223404255 6 21 0.285714286 0 1 10 13562343 0.957446809 0.422222222 0 0.422222222 0.255319149 0.180851064 9 17 0.470588235 8 0.055555556 10 11754346 1.808510638 0.388235294 0 0 0.489361702 0.404255319 15 38 0.368421053 2 0.886904762 10 8857523 4.223404255 0.425692695 0 0 0.819148936 0.712765957 25 67 0.365671642 5 0.839135654 10 12173784 2.382978723 0.361607143 0 0 0.638297872 0.478723404 16 45 0.377777778 2 0.905462185 10 13560521 3.180851064 0.391304348 0 0.391304348 0.734042553 0.606382979 20 57 0.342105263 3 0.883076923 10 7444615 0.531914894 0.44 0 0 0.340425532 0.106382979 5 10 0.5 0 1 9 11078411 2.446808511 0.208695652 0 0 0.595744681 0.478723404 12 45 0.277777778 1 0.944615385 9 1077098 0.755319149 0.323943662 0 0 0.446808511 0.170212766 4 16 0.25 0 1 9 7664362 1.085106383 0.176470588 0 0 0.414893617 0.276595745 6 26 0.230769231 0 1 9 8971295 0.372340426 0.4 0 0 0.265957447 0.074468085 3 7 0.428571429 0 1 9 6226598 0.776595745 0.452054795 0 0 0.436170213 0.20212766 8 19 0.421052632 0 1 9 11567886 0.276595745 0.423076923 0 0 0.223404255 0.053191489 2 5 0.4 0 1 9 13762013 0.744680851 0.371428571 0 0 0.361702128 0.170212766 6 16 0.34375 1 0.861471861 9 9453063 1.074468085 0.405940594 0 0 0.5 0.287234043 11 27 0.407407407 0 1 9 4437595 0.755319149 0.38028169 0 0 0.446808511 0.180851064 7 17 0.382352941 1 0.875457875 9 11078085 2.712765957 0.443137255 0 0.443137255 0.680851064 0.563829787 26 53 0.481132075 1 0.962210339 9 17090284 0.808510638 0.342105263 0 0.342105263 0.436170213 0.170212766 6 16 0.375 0 1 9 10947739 0.468085106 0.318181818 0 0 0.255319149 0.117021277 5 11 0.272727273 4 0.083333333 9 11253932 1.095744681 0.466019417 0 0 0.436170213 0.255319149 13 24 0.541666667 0 1 9 11255063 3.893617021 0.019125683 0 0 0.712765957 0.627659574 2 59 0.016949153 2 -0.017241379 9 6067075 1.223404255 0.286956522 0 0 0.521276596 0.287234043 8 27 0.296296296 0 1 9 18896739 1.553191489 0.438356164 0 0.561643836 0.489361702 0.329787234 17 31 0.532258065 3 0.805642633 9 3656321 0.691489362 0.446153846 0 0 0.436170213 0.180851064 7 17 0.411764706 0 1 9 16115394 0.978723404 0.391304348 0 0 0.468085106 0.223404255 8 21 0.380952381 0 1 9 11253938 3.212765957 0.374172185 0 0.374172185 0.744680851 0.595744681 22 56 0.401785714 1 0.962852405 9 13469200 3.893617021 0.226775956 0 0 0.712765957 0.627659574 14 59 0.228813559 7 0.663817664 9 6673926 0.904255319 0.317647059 0 0 0.382978723 0.255319149 7 24 0.3125 1 0.903030303 9 8173437 1.872340426 0.426136364 0 0 0.595744681 0.457446809 22 43 0.511627907 2 0.906926407 9 11078082 0.425531915 0.225 0 0 0.255319149 0.095744681 2 9 0.222222222 0 1 9 3313851 0.808510638 0.342105263 0 0.342105263 0.436170213 0.170212766 6 16 0.375 0 1 9 17760411 1.489361702 0.485714286 0 0 0.489361702 0.329787234 16 31 0.5 1 0.935483871 9 9725555 1 0.340425532 0 0.340425532 0.361702128 0.234042553 7 22 0.340909091 1 0.898850575 9 17090278 4.287234043 0.23325062 0 0 0.755319149 0.627659574 23 59 0.389830508 2 0.928743961 9 14912415 0.468085106 0.318181818 0 0 0.255319149 0.117021277 5 11 0.272727273 4 0.083333333 9 12807175 0.329787234 0.419354839 0 0 0.244680851 0.042553191 2 4 0.5 0 1 9 1260027 1.287234043 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