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Known workaround is to enable auto eol patch mode.
eol = auto
Confirming the same problem. Just do shelve-unshelve and you get "patch failed to apply chunks".
Thanks for the workaround!
Note that the problem only happens for me if you are un-shelving a chunk that adds lines to the end of a dos-eoln file. Un-shelving to the beginning or middle appears to work correctly.
This is near the top of my list to resolve, but I'm not sure the fix will make it into this week's 2.0.1 release.
patchctx: read patch files in binary mode (fixes #276)
Issue #352 was marked as a duplicate of this issue.