Wiki
Clone wikiFlink / Logarithm Likelihood Surface
Logarithm Likelihood Surface (task LLsurface)
To analyze the logarithm likelihood surface of your data, you can use the task=LLsurface combined with one of the following names and you can also choose a limit until where the parameter will be inferred:
name default limit group population
LLsurface_alphamax 10.0 V N
LLsurface_beta -10.0 V V
LLsurface_lnkappa 10.0 V N
LLsurface_Sgroups ∄ N N
LLsurface_p ∄ N N
LLsurface_Amax 10.0 N N
LLsurface_B -10.0 V N
LLsurface_lnK -10.0 N N
LLsurface_P ∄ N N
LLsurface_Sworld ∄ N N
LLsurface_a 1.0 N N
For some of the parameters, you can also choose the group and the population that you want analyze, fixing on the command line the parameters “group” and “pop”. The value 0 is assigned for the first group (and population), and it is chosen as default.
Example of inferring the likelihood surface of alpha_max:
./Flink task=LLsurface LLsurface_alphamax alpha_max=1.0 limit=12.0 group=0 data=Flink_simulations.txt A_max=0.5 beta=-2.0 B=-6.0 lnK=-1.0 lnkappa=-1.0 S=max Sg=max P=0.5
Updated