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Copyright HER MAJESTY THE QUEEN IN RIGHT OF CANADA (2014-2017)

Acknowledgement: This work is financially supported by Agriculture & Agri-Food Canada (AAFC) funded project #97
and Canadian Safety and Security Program (CSSP) funded project CRTI 09-462RD/CSSP 30vv01.

The Automated Oligonucleotide Design Pipeline (aodp) is an utility that generates oligonucleotide signatures for
sequences in the FASTA format and for groups in a phylogeny in the Newick tree format.

AODP v2.0 is free software: you can redistribute it and/or modify it under the terms of version 3 of the
GNU General Public License (GPL) as published by the Free Software Foundation.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the
implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
(version 3) for more detaila. You should have received a copy of the GNU General Public License (version 3)
along with this program. If not, see http://www.gnu.org/licenses/.

Contact information:

 - Wen Chen, Agriculture and Agri-Food Canada <wen.chen@agr.gc.ca>
 
 - Manuel Zahariev <mz@alumni.sfu.ca>

Authors:
Manuel Zahariev* <mz@alumni.sfu.ca>, C. Andre Levesque, Wen Chen* (wen.chen@agr.gc.ca)

Publication: Zahariev, M., Chen, W., Visagie, C.M., and Lévesque, C.A. (2018). Cluster oligonucleotide signatures for rapid identification by sequencing. BMC Bioinformatics 19(1), 395. doi: 10.1186/s12859-018-2363-3.
Link: https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-018-2363-3