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  3. ROSE

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Issues (26–50 of 70)

Title T P Status Votes Assignee Created Updated Actions
#21: el capitan
bug minor resolved
#32: KeyError: '0'
bug critical resolved
young_computation
#20: TabError when running ROSE
bug major resolved
young_computation
#18: hg38
enhancement critical resolved 2
young_computation
#11: Analysis Halted
task major resolved
young_computation
#9: Mapping Issue
bug major resolved
#1: problem when running ROSE
proposal minor resolved
#46: ERROR: no associated .bai file found with bam.
bug major resolved
#48: Qi: What is the difference between "_Gateway_SuperEnhancers" and "SuperEnhancers" files? Thank you so much!
task major resolved 1
#50: chrUn_gl000220
task major new
#44: TypeError Issue
bug critical new
#49: ImportError: cannot import name 'upper' from 'string' (/home/zhang/anaconda3/lib/python3.7/string.py)
bug blocker new
#47: TypeError: float() argument must be a string or a number while running ROSE_main.py
bug major new
#41: TypeError that can't be solved
bug critical new
#45: ERROR: OPERATION TIME OUT. MAPPING OUTPUT NOT DETECTED
bug minor new
#22: Example script stuck at output 19400
bug minor new 1
#19: output changed and how to filter the super-enhancer list?
bug major new
#40: how to find out constituent enhancers within super enhancers?
bug major new
#39: What does 'CONSTITUENT_SIZE' mean ?
bug major new
#37: Example Error
bug major new
young_computation
#36: Why We have to call from the directory containing all the documents?
proposal minor new
#35: mapEnhancerFromFactor.py
task minor new
#33: How "upSearch" "downsearch" "upstream" "downstream" in "ROSE_utils.py" were defined?
proposal trivial closed
#30: How super enhacer regions are detected
task major resolved
#31: running rose with hg38
bug critical resolved
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