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Issues (1–25 of 125)

Title T P Status Votes Assignee Version Created Updated Actions
#771: atom selection for nucleic acid residues
ToDo
task minor closed
#775: error in combine select of xyz for protein and RNA moleules
ToDo
bug major closed
#681: correlation analysis
Q&A
task minor closed
#643: Error in dssp.pdb(pdb) - unhelpful error message
Q&A
proposal minor closed
#667: Phi/Psi error?
Q&A
task major closed
#676: failure to find temporary file when using stride()
bug minor closed
#889: How to calculate distance matrix between two chain in a single PDB file?
Q&A
proposal minor resolved
#853: How to extract part of protein complex with two molecules with Bio3D
Q&A
enhancement minor resolved
#843: pdb annotate
bug minor resolved 1
#827: .format_tbl() in pdb.annotate() cannot handle "source" with no value
ToDo
bug major resolved
#518: Employing consistent communities in network analsis for direct comparison between systems
Q&A
proposal major resolved 2
#782: subjecting to linearity in dccm plot respect to residue number
ToDo
task major resolved
#749: per-residue eigenvalues in PCA?
Q&A
enhancement major resolved
#715: How to do inverse atom selection in Bio3D version2.3.0
Q&A
bug major resolved
#543: Suboptimal path calculation question
Q&A
bug minor resolved
#689: plot.dccm and network analysis
Q&A
task trivial resolved
#658: struct.aln method does not fully align
enhancement minor resolved
#659: Plot values of principal components (instead proportion of variance)
Q&A
task minor resolved
#660: Unit of the eigenvalues of the PCA
Q&A
task minor resolved
#677: PCA trajectory analysis
Q&A
task minor resolved
#680: PCA for crystal structure and MD simulation
Q&A
task minor resolved
#687: dimension mismatch
Q&A
task minor resolved
#685: Time consuming network analysis
Q&A
task trivial resolved
#670: torsion.pdb with proline
Q&A
bug major resolved
#673: mass weighting could not be grouped by residues
Q&A
bug major resolved
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