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Issues (1–25 of 392)

Title T P Status Votes Assignee Version Created Updated Actions
#962: warning in NMA analysis for PDB ensemble input
ToDo
task major invalid
#858: bug using pdbaln
bug major resolved
#448: Very slow cna(cij) calculation
ToDo
enhancement major new 1
#963: How PCA contribution analysis reads residue numbers from PDB files instead of starting at 1
Q&A
task major new
#961: RMSF issue for multiple dcd file
Q&A
task major new
#960: cnapath calculation
Q&A
proposal major new
#955: "Overlap" function to calculate the similarity of two principal components
bug major new
#957: NMA issue
bug major new
#954: How to save DCCM plot generated by Bio3d in linux operating system as png format?
bug major duplicate
#953: How to save DCCM plot generated by Bio3d in linux operation system as png format?
Q&A
task major new
#952: Shiny Server license expiration
Q&A
proposal major new
#951: Missing Residues in PCA Analysis
task major resolved
#949: Assessing Validity of PCA results
Q&A
task major new
#922: Selection of cutoff.cij value
task major new
#920: How to implement elbow method for clustering to find the optimal K and how to generate a sorted table of eigenvalues with eigenvectors?
Q&A
task major new
#921: blast.pdb does not return the PDBids of PDBs with identical sequences (so called "identical proteins" by NCBI) present in the PDB database.
Q&A
bug major new
#916: Sequence alignment of several structures
bug major new
#907: sse annotation not outputting with plot.dccm graph's margin
task major new
#918: Torsion PCA issue
task major new
#914: Hello Team I faced installation and usage issue
ToDo
enhancement major new
#915: subscript out of bounds
bug major new
#917: I convert my pdb to charmm and get hydrogens removed
bug major new
#913: Extract multiple selective frames from a dcd trajectory file
task major new
#899: Usage of tor.xyz for a trajectory file
task major resolved
#876: Is it possible to calculate RoG from a MD trajectory file?
Q&A
task major resolved
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