- changed status to resolved
Fix error in example/check
Issue #116
closed
> # Explore V-J-junction length groups sizes to use subsample
> # Show the size of the largest groups
> db %>%
+ group_by(JUNCTION_LENGTH) %>%
+ do(groupGenes(., first=TRUE)) %>%
+ mutate(GROUP_ID=paste(JUNCTION_LENGTH,VJ_GROUP, sep="_")) %>%
+ ungroup() %>%
+ group_by(GROUP_ID) %>%
+ distinct(JUNCTION) %>%
+ summarize(SIZE=n()) %>%
+ arrange(desc(SIZE)) %>%
+ select(SIZE) %>%
+ top_n(10)
Error in db %>% group_by(JUNCTION_LENGTH) %>% do(groupGenes(., first = TRUE)) %>% :
could not find function "%>%"
Execution halted
** found \donttest examples: check also with --run-donttest
1 error ✖ | 0 warnings ✔ | 0 notes ✔
Error: R CMD check found ERRORs
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