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Issues (1–25 of 26)

Title T P Status Votes Assignee Created Updated Actions
#12: circleci test only wrappers that have been changed
enhancement major resolved
#25: Singularity recipe for wrappers
proposal major new 2
#26: Getting HTTPError when running wrappers
bug blocker resolved
#23: Jannovar issue within CircleCI: rebuild hg19_small.ser
bug minor resolved
#24: snakemake is not able to create conda environment
bug blocker resolved
#22: Problem with fastqc output names followed by multiqc
bug major resolved
#21: Issue with openssl
bug major resolved
#20: Missing fontconfig dependency for FastQC when running in a Docker container
bug minor resolved
#19: Allow the user to choose the STAR output type?
proposal minor new
#18: Params are used in place of input. Creating a decorator to mark these as being essential. Or not.
enhancement minor new
#17: nanosim-h wrapper not calculated max read len correctly
bug major closed
#16: problem with last star/align wrappers
bug minor new
#13: Trimmomatic 0.38 does not find pipes?
bug minor new
#15: Error trying to build docs locally
bug major resolved
#14: Thread overuse by trimmomatic wrapper
bug minor resolved
#11: badge in readme still refers to wercker
bug minor resolved
#10: include any github repo, rather than the main wrapper repo
proposal minor resolved
#9: Support for UNIX pipes in wrappers?
proposal minor resolved
#8: Testing wrappers that need big input files
bug minor resolved
#7: Test case for epic is too slow
task minor new
#5: BWA Mapping Input for Index
enhancement major resolved 1
#6: How to run tests locally?
bug trivial resolved
#4: BWA Wrapper Request - index genome
enhancement minor resolved
#1: tests
proposal major resolved
#3: Logging wrapper commands
enhancement minor resolved
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