1. Simon Roux Avatar Simon Roux
  2. Host_Prediction_Integration
  3. iphop

Issues

Filter by:

Advanced search

Issues (1–25 of 103)

Title T P Status Votes Assignee Created Updated Actions
#147: add_to_db command stalls at VHM but throws no error
bug major closed
#136: Failure in running test database
bug major closed
#35: OSError: SavedModel file does not exist
bug major on hold
#134: Multiple host
bug major closed
#132: Tensorflow error during Iphop bootup.
bug major closed
#122: gtdbtk de_novo_wf is OK but gtdbtk classify_wf: error: one of the arguments --skip_ani_screen --mash_db is required
bug major closed
#115: Issue in adding MAGs to database
bug major closed
#103: iphop_installation
bug major closed
#105: The blastn output file for the CRISPR spacers was empty
bug minor closed
#133: iPHoP predict command appears to hang
bug major closed
#130: Error with adding custom archaeal MAGs to iPHoP database.
bug major closed
#126: Database link error?
bug major closed
#33: AttributeError: module 'numpy' has no attribute 'float'.
bug major closed
#123: An error putatively related with TensorFlow version
bug major resolved
#47: Error with rafah : libnsl.so.1
bug major on hold
#41: FileNotFoundError: [Errno 2] No such file or directory: '**/Wdir/php_results/php_db_Prediction_Allhost.csv'
bug major closed
#119: Adding archaeal MAGs to the host database but no bacteria MAGs
bug major closed
#118: Whether splitting files impact the host prediction results?
bug major closed
#22: Error in adding MAGs to standard DB
bug major closed
#2: [UNEXPECTED ERROR] Error at the step 7 while loading all parse data
bug major resolved
#10: raise ValueError('Unexpected result of `predict_function` '
bug major open
#88: iPHoP v1.3.3: raise ValueError('Unexpected result of `predict_function` '
bug major closed
#112: match criteria for iphop
bug major closed
#114: DB download verification error
bug major closed
#113: Host_prediction_to_genus_m90.csv and Host_prediction_to_genome_m90.csv doens't apper at the end
bug major closed
  2. 1
  3. 2
  4. 3
  5. 4
  6. 5