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Create Hybrid Genotypes
This creates hybrid genotypes from the pairs of taxa listed in the hybrid file (tab-delimited). Initially select the loaded genotype data set. Click menu Data -> Create Hybrid Genotypes. Select the file defining the pairs of taxa.
#!script ./run_pipeline.pl -h mdp_genotype.hmp.txt -CreateHybridGenotypesPlugin -hybridFile hybrids.txt -endPlugin -export output
Example hybrid file...
33-16 33-16
33-16 38-11
33-16 4226
33-16 4722
33-16 A188
33-16 A214N
33-16 A239
Updated