Welcome to , the tool to quantify selection and drift!

Flink is a computer program to infer the locus specific selection coefficient and the population specific drift parameter, which implements an F-model using an Hidden Markov Model (HMM).
This Wiki explains the basic usage of Flink. More details on the model can be found in our publication on GENETICS:
[https://www.genetics.org/content/early/2020/10/16/genetics.120.303780)
Please cite this paper if you use Flink for your analysis.

How to get started with Flink

Install and compile Flink
Launch Flink
Simulate data
Prepare input data
Infer data
List of available tasks

Questions?

See our Frequently Asked Questions or write an email to marco.galimberti@unifr.ch or to daniel.wegmann@unifr.ch