1. Bio3D Project Avatar Bio3D Project
  2. Bio3D
  3. bio3d

Issues

Filter by:

Advanced search

Issues (1–24 of 24)

Title T P Status Votes Assignee Version Created Updated Actions
#426: Porcupine plot using Bio3D
Q&A
task minor resolved
#246: view.xyz() multiple args with con
ToDo
bug minor resolved
#381: DSSP: Error in file(con, "r") : cannot open the connection
ToDo
task minor new
#282: Distance matrix using center of mass
task minor resolved
#232: PCA-app, tab #3: Fit
ToDo
enhancement minor resolved
#223: How to extract PDB file
Q&A
task minor resolved
#235: PCA-app, connectivity in view.xyz
ToDo
bug minor resolved
#213: Identifying weights of the edges connecting communities in CNA
Q&A
task minor resolved
#188: selecting representative side chain atoms using atom.select
Q&A
task minor resolved
#191: using the cmap function
Q&A
task minor resolved
#175: Is it possible to do charge and/or hydrophobicity analysis of multiple aligned sequences in Bio3d?
enhancement minor resolved
#104: develop branch
proposal minor new
#124: pdbsplit() output filenames always using forced 4 char basename
bug minor resolved 1
#88: BUG?: trim.pdb doesn't work well with pdb without chain identifier
proposal minor resolved
#59: Modify the plot.blast() function when lots of hits are returned
enhancement minor resolved
#79: Force a time out on long running blast.pdb() jobs
enhancement minor resolved
#60: Improvements to convert.pdb()
proposal minor resolved
#53: Consider swapping summary.pdb() with print.pdb()
proposal minor resolved
#10: Reduce package size: installed size is 7.0Mb
proposal minor resolved
#48: summary.pdb() bug with het2atom=TRUE for some PDBs
bug minor resolved
#25: Rename identity() to seq.identity()
task minor resolved
#8: Rd \usage section for S3 methods
task minor resolved
#6: Documentation issues - confusing use of "system.file()" within "read.xxx()" function calls
enhancement minor resolved
#3: BUG: plot.bio3d() error when sse from stride() contains zero length for helix or sheet
bug minor resolved