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Issues (1–25 of 26)

Title T P Status Votes Assignee Version Created Updated Actions
#255: how the function seqidentity() calculate sequence identity and similarity?
Q&A
task trivial resolved
#885: Simple clustering in PC subspace-How to obtain the typical PDB structure through the clustering diagram of bio3d
task major new 1
#826: How to calculate RMSD and binding energy from the already docked ligand-receptor
Q&A
task minor resolved
#817: PCA/NMA differences
Q&A
task minor new
#787: fail to run "read.pdb"
Q&A
task minor closed
#519: Enlarging the graphical output of ensemble NMA calculations
Q&A
task major resolved
Bio3D Project
#526: Can Bio3d analyse dimers ?
Q&A
task major resolved
Bio3D Project
#430: Issue in Muscle Alignment using Windows 8?
Q&A
task trivial resolved
Bio3D Project
#386: Best tool to compare sidechains effects
Q&A
task trivial resolved
#375: PCA eigenvectors
Q&A
task major resolved
Bio3D Project
#388: DCCM (dccm.xyz.R and cov2dccm.R) - Mean substraction
Q&A
task minor resolved
#390: Ionisation state of protein residues
Q&A
task trivial resolved
#391: Dynamic cross-correlation map (DCCM)
Q&A
task major resolved
#369: How to decide on scut value in cmap function?
Q&A
task major resolved
Bio3D Project
#361: Custom annotation
Q&A
task trivial resolved
#362: Can be extracted the conformer list for any PC?
Q&A
task minor resolved
#341: could not interpret terms "node centrality", "betweenness centrality" "suboptimal paths"
Q&A
task trivial resolved
#299: Mass-weighted PCA analysis – problem with output trajectory
Q&A
task minor resolved
#268: How can I filter residue cross correlation plots in bio3d?
Q&A
task critical resolved
Bio3D Project
#251: How is core.find different from sieve fit method
Q&A
task minor resolved
#277: About NMA in Bio3D and Prody
Q&A
task trivial resolved
#282: Distance matrix using center of mass
task minor resolved
#264: Problems installing Bio3d in R
Q&A
task minor resolved
#223: How to extract PDB file
Q&A
task minor resolved
#212: atom.select in a pdbs object
Q&A
task minor resolved
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